Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM2Q96JY6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AC233263.6-201ENST00000631132 1963 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 RNU4-50P-201ENST00000364361 141 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.276-201ENST00000364732 109 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MIR490-201ENST00000384865 128 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MIR7-3-201ENST00000384898 110 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MIR34A-201ENST00000385130 110 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 SNORA69.1-201ENST00000390904 137 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AL139095.1-201ENST00000404326 391 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MTCO3P19-201ENST00000415864 321 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AL117339.3-201ENST00000418733 162 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MTND3P9-201ENST00000429526 346 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 CYCSP35-201ENST00000451978 304 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 SNORA25.11-201ENST00000515935 105 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 RNU6-397P-201ENST00000516226 104 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 SNORA70.16-201ENST00000516390 95 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 SNORA40.15-201ENST00000516884 107 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AC109479.2-201ENST00000517842 174 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 HSPE1P20-201ENST00000538133 289 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MIR5696-201ENST00000578474 85 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MIR5701-3-201ENST00000578890 82 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MIR5701-1-201ENST00000585138 82 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 MIR5701-2-201ENST00000615634 82 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 AC078938.1-201ENST00000620993 318 ntBASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PDLIM2Q96JY6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.26-201ENST00000362539 101 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.64-201ENST00000362845 102 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 RNU6-770P-201ENST00000363929 105 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 RNU6-806P-201ENST00000365147 105 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 RNU6-741P-201ENST00000383889 107 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 MIR183-201ENST00000384958 110 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 MT-TW-201ENST00000387382 68 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 SNORA40C-201ENST00000391285 128 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 RNU6-1132P-201ENST00000459214 107 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 RNU6-572P-201ENST00000516724 80 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 RNU6-612P-201ENST00000516909 102 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AP004242.1-201ENST00000533701 349 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC023157.2-201ENST00000540596 141 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC090517.1-201ENST00000569307 266 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AL390123.1-201ENST00000603216 237 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 SRGNP1-201ENST00000603392 451 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC069200.1-201ENST00000609511 323 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 MIR622-201ENST00000638396 96 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 AC010615.1-201ENST00000594254 1764 ntBASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDLIM2Q96JY6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 OR56A5-201ENST00000340110 738 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.19-201ENST00000362462 99 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 RNU6-428P-201ENST00000362942 107 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.376-201ENST00000365638 108 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 RNU6-166P-201ENST00000384371 107 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 Y_RNA.483-201ENST00000384380 101 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 SNORD15B-201ENST00000384714 146 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AP000567.1-201ENST00000406413 156 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 RNA5SP494-201ENST00000410653 129 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 RNU2-68P-201ENST00000410878 191 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AC104332.2-201ENST00000429959 156 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AL078601.1-201ENST00000444542 271 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 HMGN2P21-201ENST00000447764 270 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AC092798.1-201ENST00000458542 409 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 RNU6-377P-201ENST00000515965 102 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 RNU6-897P-201ENST00000517135 105 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AC074050.1-201ENST00000563247 211 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AL133393.1-201ENST00000603277 287 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AC004805.2-201ENST00000605382 482 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AC005046.1-201ENST00000608515 625 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AC084757.4-201ENST00000616350 526 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 AL159153.1-201ENST00000619688 317 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 U6.105-201ENST00000637379 88 ntBASIC3.23□□□□□ -1.89
PDLIM2Q96JY6 U6.104-201ENST00000637979 90 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms