Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 Y_RNA.544-201ENST00000384650 113 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 EI24P2-201ENST00000397776 1076 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 RNA5SP390-201ENST00000410191 113 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 AC099548.1-201ENST00000421443 426 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 H2AFZP5-201ENST00000446960 382 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 RNA5SP281-201ENST00000516504 135 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 TRAV8-5-201ENST00000537369 341 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 RN7SL600P-201ENST00000581811 299 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 AC134878.1-201ENST00000619901 243 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 AC006065.5-201ENST00000623427 349 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 AC018692.3-201ENST00000623929 123 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
LRCH3Q96II8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LRCH3Q96II8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRCH3Q96II8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
LRCH3Q96II8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRCH3Q96II8 SMG1P6-201ENST00000532337 2930 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.96□□□□□ -1.62
LRCH3Q96II8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LRCH3Q96II8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 AC073346.2-201ENST00000624724 2058 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 RNU6-1014P-201ENST00000383940 103 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 Y_RNA.528-201ENST00000384575 108 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 MIR518C-201ENST00000384822 101 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 RNU2-55P-201ENST00000411146 174 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 COX6CP13-201ENST00000428703 226 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 AC012308.1-201ENST00000451232 178 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 AC010469.1-201ENST00000463864 576 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 RN7SL441P-201ENST00000492388 296 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 AC108022.1-201ENST00000493466 478 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 RPL23AP94-201ENST00000512518 302 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 AC025647.1-201ENST00000517879 253 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 IGKV2D-19-201ENST00000523346 262 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 MIR3136-201ENST00000583498 78 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 AP003357.1-201ENST00000604497 148 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 AL138880.2-201ENST00000616214 239 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 MIR8059-201ENST00000620427 81 ntBASIC4.95□□□□□ -1.62
LRCH3Q96II8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.95□□□□□ -1.62
LRCH3Q96II8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRCH3Q96II8 NOL8P1-201ENST00000508336 3529 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LRCH3Q96II8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 Y_RNA.52-201ENST00000362760 96 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 AP002088.1-201ENST00000382740 395 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 RNA5SP496-201ENST00000391240 109 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 OR2AH1P-201ENST00000425717 928 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 AL365496.1-201ENST00000426885 215 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 Z75741.1-201ENST00000446793 314 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 RPL39P34-201ENST00000477141 156 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 RPS29P2-201ENST00000479278 136 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 RNU6-1299P-201ENST00000516316 100 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 AC093249.4-201ENST00000564755 259 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 MTND6P33-201ENST00000571794 183 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 MIR3923-201ENST00000579521 83 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 MIR4472-2-201ENST00000582069 67 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 AL021707.8-201ENST00000609428 183 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 AC019176.2-201ENST00000611579 315 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 AC005562.2-201ENST00000618264 111 ntBASIC4.94□□□□□ -1.62
LRCH3Q96II8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.94□□□□□ -1.62
LRCH3Q96II8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRCH3Q96II8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.93□□□□□ -1.62
LRCH3Q96II8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LRCH3Q96II8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRCH3Q96II8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRCH3Q96II8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRCH3Q96II8 RNU1-75P-201ENST00000347264 129 ntBASIC4.93□□□□□ -1.62
LRCH3Q96II8 RNU6-217P-201ENST00000384164 104 ntBASIC4.93□□□□□ -1.62
LRCH3Q96II8 RNU6-1113P-201ENST00000384348 107 ntBASIC4.93□□□□□ -1.62
LRCH3Q96II8 RPL21P65-201ENST00000406094 466 ntBASIC4.93□□□□□ -1.62
LRCH3Q96II8 AC027124.2-201ENST00000428249 105 ntBASIC4.93□□□□□ -1.62
LRCH3Q96II8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.93□□□□□ -1.62
LRCH3Q96II8 RNU6-581P-201ENST00000516214 105 ntBASIC4.93□□□□□ -1.62
LRCH3Q96II8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.93□□□□□ -1.62
LRCH3Q96II8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.93□□□□□ -1.62
LRCH3Q96II8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms