Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC007098.1-201ENST00000420122 367 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.48□□□□□ -1.85
CHFRQ96EP1 MTATP6P4-201ENST00000427725 675 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.48□□□□□ -1.85
CHFRQ96EP1 AC091021.1-201ENST00000468051 388 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.48□□□□□ -1.85
CHFRQ96EP1 AC069113.1-201ENST00000517763 267 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.48□□□□□ -1.85
CHFRQ96EP1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.48□□□□□ -1.85
CHFRQ96EP1 MIR5696-201ENST00000578474 85 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 MIR3144-201ENST00000579460 79 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 OR1M4P-201ENST00000589199 287 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AL162713.1-201ENST00000604480 262 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AC034102.8-201ENST00000615146 484 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 U6.92-201ENST00000636464 89 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 ZNF299P-201ENST00000406845 1804 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 MAPK10-362ENST00000641864 4484 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 AL353743.1-202ENST00000431724 1695 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.48□□□□□ -1.85
CHFRQ96EP1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHFRQ96EP1 Z83843.1-201ENST00000604070 3685 ntBASIC3.48□□□□□ -1.85
CHFRQ96EP1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHFRQ96EP1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHFRQ96EP1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHFRQ96EP1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHFRQ96EP1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHFRQ96EP1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 Y_RNA.383-201ENST00000383855 97 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 RNU6-22P-201ENST00000384355 107 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 MIR578-201ENST00000384828 96 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 RNA5SP494-201ENST00000410653 129 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 RNU6-394P-201ENST00000410735 107 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 AC002075.2-201ENST00000425207 252 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 AC092573.2-201ENST00000434546 243 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 AC004866.2-201ENST00000438285 481 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 RNA5SP310-201ENST00000459084 116 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 RPL30P14-201ENST00000482744 348 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 SNORA31.1-201ENST00000515993 133 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 SNORA31.5-201ENST00000516190 133 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 RNU6-677P-201ENST00000516914 101 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 AC010186.2-204ENST00000537668 439 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 EIF4BP1-201ENST00000554881 351 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 FAM60BP-201ENST00000578364 658 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 Z83818.1-201ENST00000603584 150 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 AL079305.1-201ENST00000623159 3008 ntBASIC3.47□□□□□ -1.85
CHFRQ96EP1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.47□□□□□ -1.85
CHFRQ96EP1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHFRQ96EP1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.46□□□□□ -1.85
CHFRQ96EP1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CHFRQ96EP1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.85
CHFRQ96EP1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHFRQ96EP1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CHFRQ96EP1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.46□□□□□ -1.86
CHFRQ96EP1 SNORD50.1-201ENST00000362987 71 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 RNU6-288P-201ENST00000363690 104 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 RNU6-283P-201ENST00000364788 107 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 Y_RNA.398-201ENST00000383952 99 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 Y_RNA.439-201ENST00000384119 94 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.46□□□□□ -1.86
CHFRQ96EP1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.46□□□□□ -1.86
CHFRQ96EP1 AC006028.1-201ENST00000438379 402 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.46□□□□□ -1.86
CHFRQ96EP1 NDUFB4P10-201ENST00000452541 359 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 S100A11P2-201ENST00000467589 312 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 HMGB1P25-201ENST00000468402 607 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 AC026333.2-201ENST00000542164 106 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 AC093023.1-201ENST00000547375 507 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 LRRC37A5P-203ENST00000580181 585 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 AL078605.1-201ENST00000603529 500 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 AC072026.1-201ENST00000605023 201 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 AC011921.3-201ENST00000605540 361 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 MIR15A-201ENST00000607334 83 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.46□□□□□ -1.86
CHFRQ96EP1 MIR6076-201ENST00000617521 113 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 SNORD39.4-201ENST00000620099 78 ntBASIC3.46□□□□□ -1.86
CHFRQ96EP1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CHFRQ96EP1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHFRQ96EP1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHFRQ96EP1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHFRQ96EP1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.45□□□□□ -1.86
CHFRQ96EP1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHFRQ96EP1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
CHFRQ96EP1 Y_RNA.8-201ENST00000362353 102 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.45□□□□□ -1.86
CHFRQ96EP1 RNU6-700P-201ENST00000391043 107 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 Y_RNA.602-201ENST00000410535 92 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 RNU6-607P-201ENST00000411283 108 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms