Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS3Q969F9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.29□□□□□ -1.88
HPS3Q969F9 MTCO3P13-201ENST00000577757 781 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS3Q969F9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.29□□□□□ -1.88
HPS3Q969F9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HPS3Q969F9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.29□□□□□ -1.88
HPS3Q969F9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HPS3Q969F9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.29□□□□□ -1.88
HPS3Q969F9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.29□□□□□ -1.88
HPS3Q969F9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.28□□□□□ -1.88
HPS3Q969F9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
HPS3Q969F9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.28□□□□□ -1.88
HPS3Q969F9 MTND5P30-201ENST00000452896 1731 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HPS3Q969F9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HPS3Q969F9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HPS3Q969F9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HPS3Q969F9 Y_RNA.146-201ENST00000363549 102 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RNU6-1141P-201ENST00000364520 107 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 U8.9-201ENST00000365667 134 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RNU6-842P-201ENST00000384269 107 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RNU6-310P-201ENST00000384655 107 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RNU6-174P-201ENST00000410406 106 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RNA5SP274-201ENST00000410484 108 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 EIF4EP2-201ENST00000422816 654 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RPL23AP50-201ENST00000434149 455 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.28□□□□□ -1.88
HPS3Q969F9 SNRPGP7-201ENST00000469016 106 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RPL30P12-201ENST00000474666 353 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RPS26P21-201ENST00000475397 348 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RPL36AP48-201ENST00000485521 314 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RN7SKP43-201ENST00000516173 320 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RNU6-1213P-201ENST00000517075 94 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.28□□□□□ -1.88
HPS3Q969F9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.28□□□□□ -1.88
HPS3Q969F9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.28□□□□□ -1.88
HPS3Q969F9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HPS3Q969F9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.28□□□□□ -1.88
HPS3Q969F9 AL109809.4-201ENST00000603520 2185 ntBASIC3.28□□□□□ -1.88
HPS3Q969F9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.27□□□□□ -1.89
HPS3Q969F9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.27□□□□□ -1.89
HPS3Q969F9 AL359854.1-201ENST00000614203 1594 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 Y_RNA.123-201ENST00000363338 102 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 Y_RNA.187-201ENST00000363918 113 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 RNU4-76P-201ENST00000364509 141 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 Y_RNA.419-201ENST00000384041 102 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HPS3Q969F9 AL512633.1-201ENST00000399931 655 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 Y_RNA.646-201ENST00000410980 101 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 EIF1AXP1-201ENST00000419267 435 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 COTL1P1-201ENST00000422309 375 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS3Q969F9 ELOCP24-201ENST00000456370 334 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 RN7SL283P-201ENST00000489055 303 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 RN7SKP272-201ENST00000516988 232 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 AC109329.1-201ENST00000518744 317 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 AC115990.1-201ENST00000526957 301 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.27□□□□□ -1.89
HPS3Q969F9 LARP7P3-201ENST00000579888 337 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 MIR4765-201ENST00000585007 77 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 CYP2C61P-201ENST00000604072 290 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 AL627309.6-201ENST00000606857 840 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 AC022140.2-201ENST00000623500 188 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 MTND5P10-201ENST00000603719 1809 ntBASIC3.27□□□□□ -1.89
HPS3Q969F9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HPS3Q969F9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HPS3Q969F9 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 MTND5P19-201ENST00000424872 1794 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HPS3Q969F9 RNU6-694P-201ENST00000364071 147 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 SNORA71.1-201ENST00000364523 117 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 Y_RNA.404-201ENST00000383978 102 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 RNU6-142P-201ENST00000384019 107 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 RNU6-43P-201ENST00000384302 107 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 RNU6-784P-201ENST00000384330 106 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 MIR1289-1-201ENST00000408836 144 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 RNU2-23P-201ENST00000410545 195 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 RN7SKP123-201ENST00000410732 291 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.26□□□□□ -1.89
HPS3Q969F9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.26□□□□□ -1.89
HPS3Q969F9 Z98742.2-201ENST00000431564 187 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AL031659.1-201ENST00000447075 539 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.26□□□□□ -1.89
HPS3Q969F9 RNU7-152P-201ENST00000458982 64 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AC112771.1-201ENST00000463581 102 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AP004217.1-201ENST00000480579 346 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.26□□□□□ -1.89
HPS3Q969F9 HSPE1P4-201ENST00000550617 308 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AC007375.1-201ENST00000554513 578 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.26□□□□□ -1.89
HPS3Q969F9 AL137843.1-201ENST00000605078 385 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 AC080078.3-201ENST00000605407 463 ntBASIC3.26□□□□□ -1.89
HPS3Q969F9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.26□□□□□ -1.89
HPS3Q969F9 MTND5P9-201ENST00000503854 1755 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 AL161431.1-201ENST00000618966 4205 ntBASIC3.25□□□□□ -1.89
HPS3Q969F9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms