Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRF1Q92994 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.91□□□□□ -1.78
BRF1Q92994 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.91□□□□□ -1.78
BRF1Q92994 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRF1Q92994 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRF1Q92994 LINC02555-201ENST00000563933 1951 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
BRF1Q92994 ZNF826P-207ENST00000622273 1910 ntBASIC3.9□□□□□ -1.78
BRF1Q92994 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
BRF1Q92994 Y_RNA.20-201ENST00000362479 113 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 RNA5SP50-201ENST00000363731 107 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 SNORD32A-201ENST00000364805 84 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 Y_RNA.515-201ENST00000384535 112 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 MIR548I3-201ENST00000408378 149 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 MIR548H3-201ENST00000408771 118 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 MIR548I1-201ENST00000408810 149 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AC093578.1-201ENST00000415219 368 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AC074117.2-201ENST00000417130 397 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AC004383.1-201ENST00000438135 289 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AC007969.2-201ENST00000441891 191 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AC009296.1-201ENST00000443146 155 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AC125238.1-201ENST00000448842 249 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AL353705.4-201ENST00000449661 238 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.9□□□□□ -1.79
BRF1Q92994 RN7SL442P-201ENST00000473804 320 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 RPS4XP22-201ENST00000480755 780 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 RN7SL293P-201ENST00000481765 281 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 RPS23P5-201ENST00000495419 428 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 RPS27AP10-201ENST00000496103 208 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 RNU6-1012P-201ENST00000516606 109 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 IGKV2-23-201ENST00000518729 323 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 AC093023.1-201ENST00000547375 507 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 HIGD1AP1-201ENST00000550979 275 ntBASIC3.9□□□□□ -1.79
BRF1Q92994 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BRF1Q92994 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
BRF1Q92994 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRF1Q92994 AC002546.1-201ENST00000588041 2504 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 RNU6-1301P-201ENST00000362724 104 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 snoU2_19.2-201ENST00000363024 80 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 Y_RNA.416-201ENST00000384014 113 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 SNORD116-20-201ENST00000384529 92 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 RNA5SP44-201ENST00000410446 133 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 RNU2-37P-201ENST00000410695 177 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.89□□□□□ -1.79
BRF1Q92994 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.89□□□□□ -1.79
BRF1Q92994 TOMM22P6-201ENST00000465035 409 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 RPS26P21-201ENST00000475397 348 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 RPL30P1-201ENST00000488676 339 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 Y_RNA.673-201ENST00000516306 88 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.89□□□□□ -1.79
BRF1Q92994 AC136932.1-201ENST00000574771 208 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.89□□□□□ -1.79
BRF1Q92994 MIR4300-201ENST00000581016 96 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 MIR4276-201ENST00000584832 70 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 AC020895.1-201ENST00000595362 272 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 AL109918.3-201ENST00000603072 338 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 AL162713.1-201ENST00000604480 262 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 Y_RNA.772-201ENST00000606692 102 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.89□□□□□ -1.79
BRF1Q92994 AL353743.1-202ENST00000431724 1695 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 AL133383.2-201ENST00000622958 2336 ntBASIC3.89□□□□□ -1.79
BRF1Q92994 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRF1Q92994 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
BRF1Q92994 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
BRF1Q92994 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BRF1Q92994 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
BRF1Q92994 SNORD81.1-201ENST00000363064 77 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 SNORD6-201ENST00000365444 73 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 Y_RNA.477-201ENST00000384352 108 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 SNORA1.3-201ENST00000384676 136 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 MRPL35P1-201ENST00000404272 572 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 SNRPGP5-201ENST00000456003 220 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 SCARNA20.6-201ENST00000517251 106 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.88□□□□□ -1.79
BRF1Q92994 uc_338.1-201ENST00000612113 180 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 AC240442.1-201ENST00000616055 283 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 MIR376A1-201ENST00000616574 68 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.88□□□□□ -1.79
BRF1Q92994 AC048347.1-201ENST00000624621 427 ntBASIC3.88□□□□□ -1.79
BRF1Q92994 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BRF1Q92994 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
BRF1Q92994 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
BRF1Q92994 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
BRF1Q92994 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BRF1Q92994 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.87□□□□□ -1.79
BRF1Q92994 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
BRF1Q92994 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BRF1Q92994 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.87□□□□□ -1.79
BRF1Q92994 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
BRF1Q92994 RNU6-270P-201ENST00000364131 105 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 MIR215-201ENST00000384858 110 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 MIR153-2-201ENST00000385225 87 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 SNORD78.2-201ENST00000391076 69 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 RNA5SP229-201ENST00000410809 99 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.87□□□□□ -1.79
BRF1Q92994 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.87□□□□□ -1.79
BRF1Q92994 MRPL42P6-201ENST00000486397 371 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 AF186996.7-201ENST00000492781 209 ntBASIC3.87□□□□□ -1.79
BRF1Q92994 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms