Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC073657.2-201ENST00000605661 303 ntBASIC3.34□□□□□ -1.87
CCHCR1Q8TD31 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.34□□□□□ -1.87
CCHCR1Q8TD31 AC024581.2-201ENST00000619986 252 ntBASIC3.34□□□□□ -1.87
CCHCR1Q8TD31 AL162373.1-201ENST00000620433 407 ntBASIC3.34□□□□□ -1.87
CCHCR1Q8TD31 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CCHCR1Q8TD31 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCHCR1Q8TD31 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCHCR1Q8TD31 MTND5P16-201ENST00000460269 1703 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 SNORD56.1-201ENST00000362913 68 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 Y_RNA.133-201ENST00000363428 110 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 SNORD32A-201ENST00000364805 84 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 Y_RNA.314-201ENST00000365114 102 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 RNU6-1105P-201ENST00000384774 107 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 MIR34B-201ENST00000385076 84 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 RNA5SP252-201ENST00000391131 119 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 MTCYBP10-201ENST00000424905 650 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 RPS15AP5-201ENST00000436276 388 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 MTND3P2-201ENST00000438452 342 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC112492.4-201ENST00000456549 352 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC034236.1-201ENST00000469891 373 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AP001025.1-201ENST00000486139 332 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC015911.1-201ENST00000495111 156 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 RNU6-764P-201ENST00000516396 105 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 RNU7-4P-201ENST00000516961 62 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 SNORD19.2-201ENST00000516978 73 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 ACA59.2-201ENST00000517061 156 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC009812.2-201ENST00000517657 457 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC004584.2-201ENST00000570407 410 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC060766.3-201ENST00000591442 263 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AL162713.1-201ENST00000604480 262 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 AC138305.3-201ENST00000624988 240 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 MIR4272-201ENST00000635924 64 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 MIR3529-201ENST00000637713 78 ntBASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CCHCR1Q8TD31 Y_RNA.39-201ENST00000362620 98 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 RNU4-42P-201ENST00000364738 142 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 RNU6-487P-201ENST00000365430 104 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 RNU6-1245P-201ENST00000411130 106 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 RPL23AP95-201ENST00000426806 265 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AL161651.1-201ENST00000440882 223 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 CHEK2P4-201ENST00000450340 246 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AL513124.1-201ENST00000450410 614 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 RN7SKP210-201ENST00000459176 261 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AC021146.2-201ENST00000504736 556 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AC110794.1-201ENST00000505816 425 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 CKS1BP7-201ENST00000522230 235 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AL590705.4-201ENST00000532209 134 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AC069200.1-201ENST00000609511 323 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AC008121.3-201ENST00000618726 433 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 AC233263.6-201ENST00000631132 1963 ntBASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCHCR1Q8TD31 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 RNU6-858P-201ENST00000362436 107 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 SNORA63.1-201ENST00000362493 131 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 RNU6-622P-201ENST00000384272 103 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 MIR625-201ENST00000385047 85 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 RNU6-700P-201ENST00000391043 107 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 MTCYBP2-201ENST00000407745 171 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 MIR548F4-201ENST00000408515 105 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 RNA5SP494-201ENST00000410653 129 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AL365496.1-201ENST00000426885 215 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AL353752.1-201ENST00000454946 260 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AC008155.2-201ENST00000464337 397 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AC074250.1-201ENST00000511117 192 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 SNORA40.14-201ENST00000516543 86 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 SNORA31.21-201ENST00000517180 77 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AL117187.1-201ENST00000555482 181 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AC091152.3-201ENST00000604227 325 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AC087588.2-201ENST00000617667 426 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AL138825.1-201ENST00000618587 192 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AC009541.1-201ENST00000438279 2662 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 AC091812.1-201ENST00000432235 1948 ntBASIC3.31□□□□□ -1.88
CCHCR1Q8TD31 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms