Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 MIR4431-201ENST00000579990 94 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AC092628.2-201ENST00000622492 339 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 SNORA43.4-201ENST00000629559 138 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AL034408.1-202ENST00000636088 415 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AC009093.8-201ENST00000641769 292 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 MAPK10-372ENST00000641954 3413 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-899P-201ENST00000363947 107 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-1056P-201ENST00000383996 107 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-178P-201ENST00000384631 104 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AL139247.1-201ENST00000422768 325 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AC098614.2-201ENST00000426040 255 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AL591419.1-201ENST00000427423 339 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AC243964.1-201ENST00000441814 261 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AC074290.1-201ENST00000448883 135 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AL133162.1-201ENST00000463228 453 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 RPL31P13-201ENST00000484151 370 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 UBE2CP3-201ENST00000502715 450 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 CYCTP-201ENST00000504253 315 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 Y_RNA.797-201ENST00000515977 94 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 SNORA43.2-201ENST00000516652 128 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 MIR3944-201ENST00000581277 108 ntBASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SHKBP1Q8TBC3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 DEFB108F-201ENST00000344638 222 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 Y_RNA.101-201ENST00000363154 102 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 RNU1-89P-201ENST00000384592 164 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 Y_RNA.542-201ENST00000384641 111 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 MIR23A-201ENST00000385245 73 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 U3.19-201ENST00000390893 196 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 RNY4P18-201ENST00000391107 89 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-381P-201ENST00000391259 108 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 RPL12P46-201ENST00000436610 195 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 SNORD116-26-201ENST00000516006 96 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AC100767.1-201ENST00000528178 123 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AC107918.3-201ENST00000533272 382 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AC016256.1-201ENST00000547971 354 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AC107016.1-201ENST00000550463 337 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 DNAJC19P2-201ENST00000593340 302 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AC020914.4-201ENST00000597690 277 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AC024153.1-201ENST00000603103 365 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 MIR3658-201ENST00000636291 56 ntBASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHKBP1Q8TBC3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 RNA5SP502-201ENST00000362694 119 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 SNORD115-8-201ENST00000363856 82 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 SNORD32A-201ENST00000364805 84 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 SNORA72.2-201ENST00000365028 127 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 SNORD115-38-201ENST00000365037 82 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 Y_RNA.420-201ENST00000384043 110 ntBASIC4.03□□□□□ -1.76
SHKBP1Q8TBC3 Y_RNA.563-201ENST00000384707 108 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms