Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL356867.1-201ENST00000429623 299 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 snoU13.4-201ENST00000458916 104 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC025465.3-201ENST00000510570 311 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 SNORA31.8-201ENST00000516327 108 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-897P-201ENST00000517135 105 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC144568.1-201ENST00000520139 137 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 TRAV28-201ENST00000557548 323 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 TGIF1P1-201ENST00000558095 802 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AL645944.1-201ENST00000603857 493 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC136601.2-201ENST00000604356 474 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC004805.2-201ENST00000605382 482 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC004852.3-201ENST00000614131 326 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 SRP72P2-201ENST00000344851 1979 ntBASIC3.29□□□□□ -1.88
SLC44A3Q8N4M1 AC010615.1-201ENST00000594254 1764 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-428P-201ENST00000362942 107 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 SNORA71.1-201ENST00000364523 117 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 RPS29P13-201ENST00000402041 169 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-121P-201ENST00000410525 99 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 AC092423.1-201ENST00000430165 186 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 RPEP5-201ENST00000441137 268 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 PIGFP3-201ENST00000441918 722 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 AC006539.3-201ENST00000454258 129 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 AC092798.1-201ENST00000458542 409 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 RNA5SP356-201ENST00000515972 94 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-612P-201ENST00000516909 102 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 RNA5SP165-201ENST00000517142 115 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 AC109479.2-201ENST00000517842 174 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 AL390123.1-201ENST00000603216 237 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 MIR622-201ENST00000638396 96 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 AC091152.2-201ENST00000591628 2569 ntBASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SLC44A3Q8N4M1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.28□□□□□ -1.89
SLC44A3Q8N4M1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC017071.1-201ENST00000564407 2204 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 FTLP6-201ENST00000355274 422 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 Y_RNA.14-201ENST00000362415 103 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 Y_RNA.19-201ENST00000362462 99 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 Y_RNA.60-201ENST00000362831 98 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-770P-201ENST00000363929 105 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-708P-201ENST00000384217 107 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-611P-201ENST00000384276 104 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 SNORA48.8-201ENST00000391324 134 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 RNA5SP494-201ENST00000410653 129 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 RNU2-64P-201ENST00000411315 191 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC007098.1-201ENST00000420122 367 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC098614.2-201ENST00000426040 255 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AL078601.1-201ENST00000444542 271 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC010265.1-201ENST00000513509 211 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-397P-201ENST00000516226 104 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-572P-201ENST00000516724 80 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 HSPE1P20-201ENST00000538133 289 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 GTF3AP2-201ENST00000557014 266 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 MIR3162-201ENST00000581818 82 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AL109918.3-201ENST00000603072 338 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AP002826.1-201ENST00000608835 315 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC130454.1-201ENST00000622948 401 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC099506.2-201ENST00000623074 221 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC090617.7-201ENST00000623952 126 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 U4.7-201ENST00000638126 106 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC093010.3-201ENST00000570269 15214 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC000403.1-201ENST00000613696 3585 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 AC007785.2-201ENST00000598627 1916 ntBASIC3.27□□□□□ -1.89
SLC44A3Q8N4M1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 OR56A5-201ENST00000340110 738 ntBASIC3.26□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-600P-201ENST00000362524 99 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms