Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZFRP1-201ENST00000457579 2970 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 RNA5SP28-201ENST00000363841 119 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 Y_RNA.495-201ENST00000384435 112 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 MIR548A3-201ENST00000385297 97 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AL732292.1-201ENST00000426692 226 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AC005300.1-201ENST00000428401 373 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AC093331.1-201ENST00000521474 169 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 EIF4A1P12-201ENST00000551910 141 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 MIR6853-201ENST00000619642 74 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 AC112200.1-201ENST00000625015 234 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 FAM35BP-202ENST00000497389 3337 ntBASIC4.39□□□□□ -1.71
CCDC116Q8IYX3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 SCN1A-220ENST00000641603 12506 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 SNORA18.2-201ENST00000383865 132 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 RN7SKP267-201ENST00000410381 285 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 SNORA36B-201ENST00000410438 131 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 RN7SKP100-201ENST00000411258 284 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 Z82209.1-201ENST00000422141 2135 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AC016831.4-201ENST00000438302 307 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 RPS4XP2-201ENST00000458402 793 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 RPS29P2-201ENST00000479278 136 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 RNU7-115P-201ENST00000516433 55 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 Vault.1-201ENST00000516474 102 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AC015912.2-201ENST00000571053 181 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 MIR4737-201ENST00000583979 81 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AC006133.1-201ENST00000617106 264 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 MAPK10-320ENST00000641462 6696 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AC010300.1-201ENST00000600671 5134 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AC138915.1-201ENST00000565427 1685 ntBASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC116Q8IYX3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 U3.8-201ENST00000363675 217 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 Y_RNA.369-201ENST00000365568 117 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 RNU6-32P-201ENST00000383948 107 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 SNORA20B-201ENST00000384220 132 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 RNU6-13P-201ENST00000384248 107 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 RNU6-12P-201ENST00000384604 107 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 RNU6-41P-201ENST00000384741 107 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 MIR195-201ENST00000385194 87 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 MIR550A3-201ENST00000390735 95 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 AL139281.1-201ENST00000422120 335 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 SNRPGP8-201ENST00000454064 226 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 RNU6-928P-201ENST00000516876 104 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 AC091042.1-201ENST00000579213 173 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 AC015813.4-201ENST00000610469 179 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 Mico1.1-201ENST00000611698 204 ntBASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC116Q8IYX3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 AL590240.1-201ENST00000334118 313 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 Y_RNA.114-201ENST00000363265 113 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 Y_RNA.120-201ENST00000363304 110 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 AP002088.1-201ENST00000382740 395 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 U8.12-201ENST00000384701 133 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 MIR1302-4-201ENST00000408701 150 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 MIR1278-201ENST00000408753 81 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 MLLT10P1-201ENST00000418346 262 ntBASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC116Q8IYX3 RNA5SP309-201ENST00000516670 106 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms