Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU6-461P-201ENST00000364195 107 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 Y_RNA.279-201ENST00000364763 95 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 RNU6-336P-201ENST00000364891 107 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 MIR218-1-201ENST00000384999 110 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 RPL21P111-201ENST00000418453 477 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 MTND5P20-201ENST00000448677 143 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 MTND3P10-201ENST00000450967 341 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 U8.21-201ENST00000459536 136 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AP001025.1-201ENST00000486139 332 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 RPS29P21-201ENST00000496272 170 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 HMGN1P12-201ENST00000499125 195 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC091951.2-201ENST00000500762 203 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 RNU6-256P-201ENST00000516747 97 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.91□□□□□ -1.94
HERC6Q8IVU3 ZNF861P-201ENST00000588126 639 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AL158827.2-201ENST00000602494 330 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AL022345.1-201ENST00000607292 135 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC090115.4-201ENST00000609970 188 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 uc_338.15-201ENST00000615470 191 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AL691447.3-201ENST00000635020 330 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
HERC6Q8IVU3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.94
HERC6Q8IVU3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HERC6Q8IVU3 RNU6-1252P-201ENST00000363054 104 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 SNORD56.5-201ENST00000364281 72 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 RNU6-933P-201ENST00000384424 107 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 RNU1-57P-201ENST00000384491 166 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 RNU6-1222P-201ENST00000384615 107 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 MIR544A-201ENST00000384855 91 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 MIR592-201ENST00000384959 97 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 SNORD73A-201ENST00000386062 65 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 RNU2-25P-201ENST00000411041 191 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 RN7SKP192-201ENST00000411291 327 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 SNAP23P1-201ENST00000433229 246 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC007969.2-201ENST00000441891 191 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 RPL39P29-201ENST00000447779 157 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC080013.2-201ENST00000460866 323 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AP005597.4-201ENST00000526762 229 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC115990.1-201ENST00000526957 301 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC009994.1-201ENST00000606889 253 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 AC097372.5-201ENST00000623665 376 ntBASIC2.9□□□□□ -1.95
HERC6Q8IVU3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.9□□□□□ -1.95
HERC6Q8IVU3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HERC6Q8IVU3 SNORD88.1-201ENST00000408684 91 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 RNU2-23P-201ENST00000410545 195 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AC092427.1-202ENST00000430569 476 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AL645568.3-201ENST00000433683 316 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.89□□□□□ -1.95
HERC6Q8IVU3 IFNA20P-201ENST00000436840 528 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 USP9YP8-201ENST00000441913 500 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 PMCHL2-203ENST00000457791 237 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AC096745.1-201ENST00000509945 370 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AC092436.3-201ENST00000511788 257 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AC104576.1-201ENST00000524225 88 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AP000889.2-201ENST00000532684 490 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AL356280.1-201ENST00000603614 379 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AC009314.1-201ENST00000603871 304 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AC104260.1-201ENST00000616660 539 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.89□□□□□ -1.95
HERC6Q8IVU3 AL136221.1-201ENST00000621449 509 ntBASIC2.89□□□□□ -1.95
HERC6Q8IVU3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HERC6Q8IVU3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 MIR26A1-201ENST00000362205 77 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 RNU6-562P-201ENST00000362731 107 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AL451074.5-201ENST00000415894 435 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 Z98742.3-201ENST00000418637 326 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC112220.1-201ENST00000434628 355 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.88□□□□□ -1.95
HERC6Q8IVU3 SNRPEP8-201ENST00000442866 260 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 RPL30P12-201ENST00000474666 353 ntBASIC2.88□□□□□ -1.95
HERC6Q8IVU3 AC090525.1-201ENST00000479116 478 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms