Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 SNORA14.1-201ENST00000516113 141 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 Y_RNA.693-201ENST00000516641 110 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 RN7SKP256-201ENST00000517201 314 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 COPS8P3-201ENST00000526024 482 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC087241.2-201ENST00000535801 324 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 OR11H5P-201ENST00000554039 926 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC026271.5-201ENST00000577873 130 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 MIR3124-201ENST00000582636 67 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC004908.3-201ENST00000610248 625 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 AC063943.3-201ENST00000615562 356 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
PRPF39Q86UA1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
PRPF39Q86UA1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
PRPF39Q86UA1 RNU6-82P-201ENST00000363970 107 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 SNORD114-30-201ENST00000364448 72 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 RPS15AP10-201ENST00000432472 382 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.42□□□□□ -2.02
PRPF39Q86UA1 AC013470.1-201ENST00000453438 462 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.42□□□□□ -2.02
PRPF39Q86UA1 RNU1-41P-201ENST00000516161 162 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 RNU1-48P-201ENST00000516400 162 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 RNU6-314P-201ENST00000516574 104 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 RNU6-667P-201ENST00000517186 102 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 AC034114.1-201ENST00000520293 285 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.42□□□□□ -2.02
PRPF39Q86UA1 PRELID2P1-201ENST00000552837 301 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.42□□□□□ -2.02
PRPF39Q86UA1 AL031274.2-201ENST00000599419 203 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 VN1R107P-201ENST00000601784 209 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 AC103810.6-201ENST00000606708 136 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 AC046143.2-201ENST00000609789 160 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 AC012640.5-201ENST00000623897 319 ntBASIC2.42□□□□□ -2.02
PRPF39Q86UA1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PRPF39Q86UA1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRPF39Q86UA1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 RNU6-623P-201ENST00000363143 105 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 RNU4-56P-201ENST00000364700 142 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 RNU6-43P-201ENST00000384302 107 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 SNORA80E-201ENST00000384744 137 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 SNORD23.1-201ENST00000408212 104 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 ARL5AP1-201ENST00000418991 388 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AL121890.1-201ENST00000435457 205 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 SEPT14P3-201ENST00000439401 183 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AL732372.2-207ENST00000445840 183 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 SEPT14P2-201ENST00000453405 183 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 YWHAEP4-201ENST00000505390 198 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 SEPT14P4-201ENST00000513445 186 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 RNU6-1281P-201ENST00000516223 105 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 RNU6-323P-201ENST00000521915 107 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 FO082796.1-201ENST00000523795 183 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AC012557.2-201ENST00000605919 418 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AL357078.3-201ENST00000607528 618 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AC015540.1-201ENST00000615828 501 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 MIR6715A-201ENST00000615929 79 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 MIR203B-201ENST00000636080 86 ntBASIC2.41□□□□□ -2.02
PRPF39Q86UA1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRPF39Q86UA1 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.02
PRPF39Q86UA1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 RNU6-38P-201ENST00000384085 107 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 RPS29P13-201ENST00000402041 169 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AL356320.1-201ENST00000429616 163 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AC244670.1-201ENST00000436879 112 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AL353705.4-201ENST00000449661 238 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 MTND3P16-201ENST00000452205 344 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 RNU6-333P-201ENST00000459117 107 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AC091885.1-201ENST00000506658 268 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 RNU6-965P-201ENST00000516721 96 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.704-201ENST00000516851 102 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 HSPE1P4-201ENST00000550617 308 ntBASIC2.4□□□□□ -2.03
PRPF39Q86UA1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.4□□□□□ -2.03
PRPF39Q86UA1 AC093783.1-201ENST00000612976 329 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms