Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL590002.1-201ENST00000406554 418 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AL441985.1-201ENST00000457727 251 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 SNRPFP3-201ENST00000457792 225 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNU6-717P-201ENST00000459076 104 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 snoU13.18-201ENST00000459483 104 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AC083798.1-201ENST00000472671 131 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNA5SP401-201ENST00000515920 127 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 TPRKBP2-201ENST00000565969 475 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AC092325.1-201ENST00000566449 554 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 MIR5571-201ENST00000577998 113 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 MIR5692A1-201ENST00000580523 69 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AC069294.1-201ENST00000608397 350 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 MIR6134-201ENST00000617606 109 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 uc_338.11-201ENST00000619132 160 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 AP000553.5-201ENST00000641933 54 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NPHP3Q7Z494 MAPK10-266ENST00000641066 6555 ntBASIC2.48□□□□□ -2.01
NPHP3Q7Z494 RNA5SP160-201ENST00000364866 120 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 MIR10A-201ENST00000385043 110 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 SNORA16.2-201ENST00000390991 127 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AC004383.1-201ENST00000438135 289 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AC003071.1-201ENST00000451219 789 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 BTF3P15-201ENST00000455606 336 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AC025033.1-201ENST00000463883 194 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 RNU6-835P-201ENST00000516974 104 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AC146944.4-201ENST00000602697 718 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 BX248123.2-201ENST00000606318 124 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 AL109809.4-201ENST00000603520 2185 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.47□□□□□ -2.01
NPHP3Q7Z494 Z82209.1-201ENST00000422141 2135 ntBASIC2.47□□□□□ -2.01
NPHP3Q7Z494 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.46□□□□□ -2.01
NPHP3Q7Z494 RNU6-486P-201ENST00000363116 107 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 RNU6-1090P-201ENST00000364065 94 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NPHP3Q7Z494 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPHP3Q7Z494 MIR548F1-201ENST00000408667 84 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 HMGB3P2-201ENST00000411913 584 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 CYCSP33-201ENST00000414485 327 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AL353621.1-201ENST00000418219 243 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AL627311.1-201ENST00000431514 115 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.46□□□□□ -2.02
NPHP3Q7Z494 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.46□□□□□ -2.02
NPHP3Q7Z494 RNU7-180P-201ENST00000459240 63 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AC116655.1-201ENST00000508324 901 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AC104136.1-201ENST00000512969 394 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 SNORA25.11-201ENST00000515935 105 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 RNA5SP112-201ENST00000515937 99 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 ACA59.2-201ENST00000517061 156 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 RNA5SP490-201ENST00000517141 136 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 HMGB1P33-201ENST00000563485 527 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AC105245.1-201ENST00000581934 244 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 AL512598.1-201ENST00000610158 273 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 CDC27P3-201ENST00000635418 1910 ntBASIC2.46□□□□□ -2.02
NPHP3Q7Z494 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.46□□□□□ -2.02
NPHP3Q7Z494 Y_RNA.481-201ENST00000384373 102 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 RNU6-393P-201ENST00000384475 107 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 RNU6-748P-201ENST00000384648 107 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 RNU2-3P-201ENST00000410144 191 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 RNA5SP338-201ENST00000410495 85 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.45□□□□□ -2.02
NPHP3Q7Z494 CYCSP48-201ENST00000417124 323 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.45□□□□□ -2.02
NPHP3Q7Z494 TIMM9P3-201ENST00000428659 274 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 SUMO1P4-201ENST00000429430 302 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 MTND4P14-201ENST00000435799 1354 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 RPL23AP7-203ENST00000449021 469 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 NDUFB1P2-201ENST00000449477 176 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 AL021397.1-201ENST00000451806 248 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 RNU6-261P-201ENST00000459506 102 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 CCDC34P1-201ENST00000507441 517 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.45□□□□□ -2.02
NPHP3Q7Z494 RNU2-69P-201ENST00000516061 100 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 MIR892C-201ENST00000516410 77 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms