Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 AC004386.2-201ENST00000441858 148 ntBASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 SNORD108-201ENST00000459332 71 ntBASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 RN7SKP19-201ENST00000516016 252 ntBASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 ACA59.2-201ENST00000517061 156 ntBASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 AL034555.1-201ENST00000604816 211 ntBASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 AP005432.2-201ENST00000608162 586 ntBASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 ZNF137P-201ENST00000456718 1920 ntBASIC3.8□□□□□ -1.8
SHISA2Q6UWI4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 SNORA67.2-201ENST00000384300 149 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 RNU6-19P-201ENST00000384718 107 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 U6atac.2-201ENST00000408644 118 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 RN7SKP101-201ENST00000411376 320 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 EIF4HP2-201ENST00000424380 563 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 RPL39P40-201ENST00000445481 146 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 Y_RNA.649-201ENST00000459077 103 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 RPL23AP56-201ENST00000460778 453 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC117454.1-201ENST00000491120 168 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 EIF4A1P12-201ENST00000551910 141 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC021739.1-201ENST00000559631 174 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC025281.1-201ENST00000567026 265 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 MIR3939-201ENST00000582614 106 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AP003357.1-201ENST00000604497 148 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 SNX18P1Y-201ENST00000616231 511 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC006133.1-201ENST00000617106 264 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC018692.3-201ENST00000623929 123 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC104623.2-202ENST00000623477 4002 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AL159152.1-201ENST00000635019 2587 ntBASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHISA2Q6UWI4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AC007656.2-201ENST00000624902 4547 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 MFSD8-242ENST00000641690 4199 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 RNA5SP509-201ENST00000364577 119 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 Y_RNA.348-201ENST00000365403 103 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 SNORA70C-201ENST00000384538 135 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 U8.12-201ENST00000384701 133 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 SNORA26.2-201ENST00000390922 122 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 RNA5SP496-201ENST00000391240 109 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 RNA5SP241-201ENST00000391326 114 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 MIR1183-201ENST00000408856 89 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 RNY4P29-201ENST00000410801 97 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AL139281.1-201ENST00000422120 335 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 COX6CP13-201ENST00000428703 226 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 RPL7AP49-201ENST00000429522 581 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AL591438.1-201ENST00000433508 581 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 HSPE1P21-201ENST00000438283 308 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 SCARNA22-201ENST00000503991 125 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 RNU6-781P-201ENST00000516377 101 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AC040958.1-201ENST00000561102 201 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AL137843.1-201ENST00000605078 385 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 AP005019.3-201ENST00000620418 560 ntBASIC3.78□□□□□ -1.8
SHISA2Q6UWI4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms