Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF43Q68DV7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RNF43Q68DV7 AC007390.2-201ENST00000606229 3803 ntBASIC4.15□□□□□ -1.75
RNF43Q68DV7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNF43Q68DV7 LINC02471-203ENST00000641941 4752 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 AC092593.1-201ENST00000515413 1815 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 AL353743.1-202ENST00000431724 1695 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 FTLP6-201ENST00000355274 422 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF43Q68DV7 SNORA63.4-201ENST00000362763 126 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 RNU1-18P-201ENST00000363062 164 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 Y_RNA.319-201ENST00000365138 92 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 RNU6-80P-201ENST00000384195 107 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 MIR487A-201ENST00000385009 80 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF43Q68DV7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 TBCAP1-201ENST00000436520 327 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 AC124916.1-201ENST00000444020 547 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 AL078601.1-201ENST00000444542 271 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF43Q68DV7 AC005042.3-201ENST00000453230 174 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF43Q68DV7 PDCD5P2-201ENST00000507570 312 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 AC091874.1-201ENST00000511402 339 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 RNU7-121P-201ENST00000516604 62 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 DEFB131C-201ENST00000528817 165 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 AP002001.1-203ENST00000534002 267 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF43Q68DV7 AC004825.2-201ENST00000616634 455 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 AC244205.2-202ENST00000635781 342 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.14□□□□□ -1.75
RNF43Q68DV7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF43Q68DV7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF43Q68DV7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF43Q68DV7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF43Q68DV7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 RNU6-527P-201ENST00000363425 104 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 RNU4-11P-201ENST00000365287 132 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 RNU4-17P-201ENST00000365598 141 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 SNORA29-201ENST00000384183 140 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 MIR34B-201ENST00000385076 84 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 RNU6-159P-201ENST00000391080 106 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF43Q68DV7 SNORA57.3-201ENST00000411095 141 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 RHEBP3-201ENST00000411920 351 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 Z85995.1-201ENST00000415547 335 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 RPL30P13-201ENST00000418873 348 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 EIF1AXP1-201ENST00000419267 435 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 AL691449.1-201ENST00000426570 421 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 BTF3P11-201ENST00000426582 477 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF43Q68DV7 AC083863.1-201ENST00000438811 231 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 RN7SL271P-201ENST00000487601 295 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 RPL29P14-201ENST00000495837 428 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 RNU4-57P-201ENST00000515980 135 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 RNA5SP290-201ENST00000517133 127 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 RNA5SP165-201ENST00000517142 115 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 MIR3200-201ENST00000580767 85 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 AC090616.3-201ENST00000582184 217 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 AL357075.2-201ENST00000614906 189 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 AC009093.8-201ENST00000641769 292 ntBASIC4.13□□□□□ -1.75
RNF43Q68DV7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF43Q68DV7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 RNU6-1272P-201ENST00000362776 107 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 U8.10-201ENST00000384260 133 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 RNU6-72P-201ENST00000384285 79 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 ANP32BP2-201ENST00000454525 545 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF43Q68DV7 AC025627.2-201ENST00000576220 160 ntBASIC4.12□□□□□ -1.75
RNF43Q68DV7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF43Q68DV7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms