Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 SNORA31-201ENST00000362607 130 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 SNORD87-201ENST00000364849 89 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 SNORA20-201ENST00000384662 132 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 SNORA1.3-201ENST00000384676 136 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-376P-201ENST00000384731 106 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 AL031003.1-201ENST00000404229 172 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-710P-201ENST00000410424 105 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 AC027124.2-201ENST00000428249 105 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 RNA5SP310-201ENST00000459084 116 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-1211P-201ENST00000459179 105 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 RN7SL293P-201ENST00000481765 281 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 SNORA72.7-201ENST00000516349 94 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 AC006349.1-201ENST00000555526 235 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF38BQ5VTL8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 AL133243.3-201ENST00000617415 3004 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 Z82217.1-201ENST00000625157 8149 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-1255P-201ENST00000363434 112 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-899P-201ENST00000363947 107 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-80P-201ENST00000384195 107 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 CYCSP48-201ENST00000417124 323 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 EIF4HP2-201ENST00000424380 563 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 PTGES3P4-201ENST00000426243 356 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 AC074290.1-201ENST00000448883 135 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 AC115115.1-201ENST00000449927 248 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 BX510359.1-201ENST00000456973 237 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 AC099522.1-202ENST00000514718 367 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-1007P-201ENST00000516586 107 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 AC015914.2-201ENST00000618167 288 ntBASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF38BQ5VTL8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-834P-201ENST00000362367 110 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 Y_RNA.24-201ENST00000362508 103 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 snoU2_19.4-201ENST00000364329 80 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 U1.1-201ENST00000384101 164 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-19P-201ENST00000384718 107 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 MIR626-201ENST00000385032 94 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 RNA5SP239-201ENST00000410218 129 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 AL441985.1-201ENST00000457727 251 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 RNA5SP170-201ENST00000517150 101 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 HIGD1AP1-201ENST00000550979 275 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 Y_RNA.802-201ENST00000614892 130 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 AC005562.2-201ENST00000618264 111 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 MIR3658-201ENST00000636291 56 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 AL133412.1-201ENST00000380194 2992 ntBASIC4.8□□□□□ -1.64
PRPF38BQ5VTL8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-1048P-201ENST00000364054 107 ntBASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 Y_RNA.337-201ENST00000365312 102 ntBASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 SNORD37.2-201ENST00000391075 66 ntBASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 AC004386.2-201ENST00000441858 148 ntBASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 RN7SL517P-201ENST00000462240 305 ntBASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 RPL23AP70-201ENST00000483361 460 ntBASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 RPL32P34-201ENST00000486380 400 ntBASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF38BQ5VTL8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms