Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC138915.1-201ENST00000565427 1685 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-968P-201ENST00000384076 107 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 Y_RNA.504-201ENST00000384481 104 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 MIR186-201ENST00000384988 86 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 Y_RNA.579-201ENST00000390939 94 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-1140P-201ENST00000410517 106 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC009296.1-201ENST00000443146 155 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 FO393415.2-201ENST00000480085 343 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 RPL30P1-201ENST00000488676 339 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AIG1P1-201ENST00000503376 148 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 SCARNA16.2-201ENST00000516520 172 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-567P-201ENST00000516746 107 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC073657.2-201ENST00000605661 303 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC137590.2-201ENST00000619709 240 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 AC090971.5-201ENST00000621102 293 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 MIR6852-201ENST00000621699 66 ntBASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC144BQ3MJ40 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-655P-201ENST00000362858 107 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-1210P-201ENST00000363775 107 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-1286P-201ENST00000383871 107 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 Y_RNA.419-201ENST00000384041 102 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-890P-201ENST00000384121 107 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-331P-201ENST00000384724 107 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 NUP35P1-201ENST00000422734 947 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 AC079354.2-201ENST00000453523 154 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RN7SKP210-201ENST00000459176 261 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 AC109925.1-201ENST00000478069 331 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 AC068781.1-201ENST00000488231 618 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RNA5SP384-201ENST00000516615 116 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 LARP7P3-201ENST00000579888 337 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 AL359198.2-201ENST00000611836 194 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 HMGB1P24-202ENST00000615653 685 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 AC092608.2-201ENST00000624427 218 ntBASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC144BQ3MJ40 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 RNA5SP383-201ENST00000362934 120 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 Y_RNA.813-201ENST00000364639 102 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-1040P-201ENST00000383974 107 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 SNORA26.3-201ENST00000391119 136 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 AC027575.1-201ENST00000481064 460 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 MIR5571-201ENST00000577998 113 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 AC060766.3-201ENST00000591442 263 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 AC006386.2-201ENST00000624491 75 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 AC012005.1-201ENST00000624575 75 ntBASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC144BQ3MJ40 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 MIR422A-201ENST00000362286 90 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-595P-201ENST00000363944 107 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 U3.13-201ENST00000364804 214 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 RNU4-9P-201ENST00000364951 139 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 Y_RNA.533-201ENST00000384596 114 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 MTCYBP2-201ENST00000407745 171 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 AL353705.4-201ENST00000449661 238 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 AC096576.1-201ENST00000489014 359 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 RPL17P19-201ENST00000489069 552 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-470P-201ENST00000515954 104 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 RNU2-53P-201ENST00000516257 147 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 SCARNA3-201ENST00000517097 143 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 COX6CP5-201ENST00000527162 228 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 CBX3P8-201ENST00000532412 525 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 AC093249.1-201ENST00000567049 203 ntBASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC144BQ3MJ40 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-490P-201ENST00000362985 107 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 RNY1P16-201ENST00000363063 111 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 RNU6-694P-201ENST00000364071 147 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 U6atac.2-201ENST00000408644 118 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AC243428.1-201ENST00000421099 264 ntBASIC3.72□□□□□ -1.81
CCDC144BQ3MJ40 AL590135.1-201ENST00000422215 156 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms