Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 AL008629.1-201ENST00000438615 184 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 ART2BP-201ENST00000453501 499 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST3H3Q16695 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 SNORA31.16-201ENST00000516773 139 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 SNORD60.2-201ENST00000516883 86 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 MIR548AC-201ENST00000585049 88 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 AC016727.1-205ENST00000605437 569 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 RNU6-1192P-201ENST00000612197 107 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 RNU6-489P-201ENST00000618289 107 ntBASIC0.8□□□□□ -2.28
HIST3H3Q16695 RNY1P10-201ENST00000363268 113 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 Y_RNA.192-201ENST00000363977 102 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 SNORA29-201ENST00000384183 140 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 SNORD116-12-201ENST00000384468 92 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 MIR222-201ENST00000384992 110 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST3H3Q16695 AC245047.4-201ENST00000433189 144 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 TOMM22P6-201ENST00000465035 409 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 AC145146.1-201ENST00000496370 254 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 AC079140.3-201ENST00000511111 550 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 AC023050.2-201ENST00000544968 387 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST3H3Q16695 MTND4LP25-201ENST00000570218 163 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST3H3Q16695 AL391646.1-201ENST00000603860 190 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 RNU6-87P-201ENST00000607561 108 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
HIST3H3Q16695 AC083806.3-201ENST00000614016 455 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST3H3Q16695 AL359547.2-201ENST00000615810 418 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 AL133216.2-202ENST00000634512 349 ntBASIC0.79□□□□□ -2.28
HIST3H3Q16695 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST3H3Q16695 MIR340-201ENST00000362125 95 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 RNU6-960P-201ENST00000364056 120 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 Y_RNA.338-201ENST00000365320 114 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 RNU6-438P-201ENST00000365561 103 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 MIR544A-201ENST00000384855 91 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 RNU6-298P-201ENST00000390888 96 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 AL136310.1-201ENST00000404926 654 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.78□□□□□ -2.28
HIST3H3Q16695 AC099677.2-201ENST00000436385 175 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST3H3Q16695 RPS23P4-201ENST00000487908 423 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 RNU6-1053P-201ENST00000515930 101 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 RNU2-10P-201ENST00000516375 211 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST3H3Q16695 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST3H3Q16695 AL022345.2-201ENST00000606307 135 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 AC026585.1-201ENST00000619582 524 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 AC027335.2-201ENST00000624030 375 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 OR4G3P-201ENST00000633500 913 ntBASIC0.78□□□□□ -2.28
HIST3H3Q16695 RNU6-862P-201ENST00000362804 105 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 RNU1-124P-201ENST00000363861 145 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 RNU6-384P-201ENST00000364900 104 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 MTND1P30-201ENST00000441241 901 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 PRPS1P1-201ENST00000445305 876 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 MTCO3P9-201ENST00000506989 781 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 RNA5SP503-201ENST00000517047 117 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 AC068587.4-201ENST00000533893 186 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST3H3Q16695 AC068620.3-201ENST00000602749 560 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 BNIP3P10-201ENST00000605360 577 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 MIR3976-201ENST00000606807 139 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 AL451064.1-201ENST00000607718 471 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 AC108747.1-201ENST00000609508 535 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 AL021879.1-201ENST00000611756 288 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 MIR6767-201ENST00000637302 66 ntBASIC0.77□□□□□ -2.29
HIST3H3Q16695 AL391516.1-201ENST00000554380 2449 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
HIST3H3Q16695 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 RNU4-15P-201ENST00000362613 141 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 Y_RNA.465-201ENST00000384293 102 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.76□□□□□ -2.29
HIST3H3Q16695 CYCSP33-201ENST00000414485 327 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 AL591043.1-201ENST00000432461 424 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 AC007969.2-201ENST00000441891 191 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.76□□□□□ -2.29
HIST3H3Q16695 HMGN2P9-201ENST00000476875 229 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.76□□□□□ -2.29
HIST3H3Q16695 AC010587.2-201ENST00000511727 448 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 MTCO3P28-201ENST00000513351 515 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 SNORD116-28-201ENST00000516123 91 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 SCARNA16.2-201ENST00000516520 172 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.76□□□□□ -2.29
HIST3H3Q16695 CYCSP23-201ENST00000519781 313 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms