Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 SNORA53-201ENST00000391141 249 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 RNU6-628P-201ENST00000410675 107 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 AC245291.1-201ENST00000419501 328 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 AL606753.1-201ENST00000427435 87 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 HMGN2P21-201ENST00000447764 270 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 AC125238.1-201ENST00000448842 249 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1I3Q14994 AP000873.1-201ENST00000463987 400 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 RPL31P13-201ENST00000484151 370 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 RNU1-103P-201ENST00000516502 125 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1I3Q14994 LINC00933-203ENST00000559812 219 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 AC007224.1-201ENST00000564410 144 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1I3Q14994 AC024153.1-201ENST00000603103 365 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 RMST_6.1-201ENST00000611980 203 ntBASIC3.72□□□□□ -1.81
NR1I3Q14994 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1I3Q14994 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NR1I3Q14994 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NR1I3Q14994 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
NR1I3Q14994 RNU6-858P-201ENST00000362436 107 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 RNA5SP383-201ENST00000362934 120 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 RNU6-942P-201ENST00000363002 107 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 Y_RNA.292-201ENST00000364904 97 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 SNORA29-201ENST00000384183 140 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 Y_RNA.504-201ENST00000384481 104 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 MIR518D-201ENST00000385014 87 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 RNA5SP213-201ENST00000391031 106 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 RNU6-1140P-201ENST00000410517 106 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 WARS2P1-201ENST00000429678 537 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.71□□□□□ -1.82
NR1I3Q14994 SNRPGP7-201ENST00000469016 106 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 RN7SL132P-201ENST00000478131 296 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 SEPT14P8-201ENST00000508026 178 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 RNU6-703P-201ENST00000516946 107 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 RNU2-31P-201ENST00000516954 155 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 RNU6-1212P-201ENST00000517023 104 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 MIR2116-201ENST00000517221 80 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 AP004607.1-201ENST00000524456 203 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 PARP1P2-201ENST00000556806 195 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 UBL5P4-201ENST00000562584 236 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.71□□□□□ -1.82
NR1I3Q14994 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.71□□□□□ -1.82
NR1I3Q14994 SNORD113-5-201ENST00000607261 78 ntBASIC3.71□□□□□ -1.82
NR1I3Q14994 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.71□□□□□ -1.82
NR1I3Q14994 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.71□□□□□ -1.82
NR1I3Q14994 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NR1I3Q14994 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NR1I3Q14994 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NR1I3Q14994 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NR1I3Q14994 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.7□□□□□ -1.82
NR1I3Q14994 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NR1I3Q14994 RNU1-140P-201ENST00000365040 165 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 RNY4P28-201ENST00000365281 93 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NR1I3Q14994 RNU6-541P-201ENST00000384709 110 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 Y_RNA.569-201ENST00000384749 103 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 MIR153-2-201ENST00000385225 87 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 MIR493-201ENST00000385254 89 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NR1I3Q14994 RN7SKP111-201ENST00000410349 271 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 RN7SKP51-201ENST00000410781 304 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.7□□□□□ -1.82
NR1I3Q14994 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 AC098831.1-201ENST00000440661 216 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.7□□□□□ -1.82
NR1I3Q14994 RNU6-1114P-201ENST00000516022 107 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 RNU1-143P-201ENST00000516296 146 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 RNU7-110P-201ENST00000516891 62 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 SCARNA20.6-201ENST00000517251 106 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NR1I3Q14994 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.7□□□□□ -1.82
NR1I3Q14994 MIR5695-201ENST00000579717 85 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 U1.23-201ENST00000610293 146 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 MIR6748-201ENST00000610433 71 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 RNU1-68P-201ENST00000615382 146 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 AC005296.1-201ENST00000616145 209 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 U1.39-201ENST00000621562 146 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.7□□□□□ -1.82
NR1I3Q14994 AC021753.1-201ENST00000635724 168 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 SRP72P2-201ENST00000344851 1979 ntBASIC3.7□□□□□ -1.82
NR1I3Q14994 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NR1I3Q14994 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NR1I3Q14994 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NR1I3Q14994 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1I3Q14994 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1I3Q14994 SNORD56.1-201ENST00000362913 68 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 Y_RNA.122-201ENST00000363331 96 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 SNORD115-32-201ENST00000364079 82 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 SNORD116-20-201ENST00000384529 92 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 RNU1-139P-201ENST00000391307 165 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 AC092047.1-201ENST00000424997 240 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 CYCSP4-201ENST00000429682 331 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1I3Q14994 SNORD105B-201ENST00000458770 79 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 AC068657.1-201ENST00000520807 306 ntBASIC3.69□□□□□ -1.82
NR1I3Q14994 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms