Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.78□□□□□ -1.96
LTBQ06643 SET-203ENST00000372688 801 ntTSL 2 BASIC2.78□□□□□ -1.96
LTBQ06643 Y_RNA.389-201ENST00000383924 113 ntBASIC2.78□□□□□ -1.96
LTBQ06643 Y_RNA.452-201ENST00000384202 108 ntBASIC2.78□□□□□ -1.96
LTBQ06643 Y_RNA.533-201ENST00000384596 114 ntBASIC2.78□□□□□ -1.96
LTBQ06643 MIR493-201ENST00000385254 89 ntBASIC2.78□□□□□ -1.96
LTBQ06643 SNORD67-201ENST00000390833 111 ntBASIC2.78□□□□□ -1.96
LTBQ06643 RNU6-1156P-201ENST00000410365 100 ntBASIC2.78□□□□□ -1.96
LTBQ06643 RN7SKP58-201ENST00000411010 305 ntBASIC2.78□□□□□ -1.96
LTBQ06643 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
LTBQ06643 AC114482.1-201ENST00000418010 247 ntBASIC2.78□□□□□ -1.96
LTBQ06643 AC007560.1-201ENST00000426912 237 ntBASIC2.78□□□□□ -1.96
LTBQ06643 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.78□□□□□ -1.96
LTBQ06643 AC092573.2-201ENST00000434546 243 ntBASIC2.78□□□□□ -1.96
LTBQ06643 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.78□□□□□ -1.96
LTBQ06643 AC099799.1-201ENST00000439809 192 ntBASIC2.78□□□□□ -1.96
LTBQ06643 AL513124.1-201ENST00000450410 614 ntBASIC2.78□□□□□ -1.96
LTBQ06643 AC092798.1-201ENST00000458542 409 ntBASIC2.78□□□□□ -1.96
LTBQ06643 snoU109.2-201ENST00000459316 135 ntBASIC2.78□□□□□ -1.96
LTBQ06643 UBL5P3-201ENST00000475112 231 ntBASIC2.78□□□□□ -1.96
LTBQ06643 ACA59.1-201ENST00000515966 143 ntBASIC2.78□□□□□ -1.96
LTBQ06643 RNU6-572P-201ENST00000516724 80 ntBASIC2.78□□□□□ -1.96
LTBQ06643 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.78□□□□□ -1.96
LTBQ06643 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.78□□□□□ -1.96
LTBQ06643 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.78□□□□□ -1.96
LTBQ06643 AC009314.1-201ENST00000603871 304 ntBASIC2.78□□□□□ -1.96
LTBQ06643 AC002076.2-201ENST00000617362 122 ntBASIC2.78□□□□□ -1.96
LTBQ06643 AC090617.7-201ENST00000623952 126 ntBASIC2.78□□□□□ -1.96
LTBQ06643 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
LTBQ06643 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LTBQ06643 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LTBQ06643 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LTBQ06643 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.77□□□□□ -1.97
LTBQ06643 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LTBQ06643 AL359693.1-201ENST00000614959 2407 ntBASIC2.77□□□□□ -1.97
LTBQ06643 RNU4-82P-201ENST00000362443 140 ntBASIC2.77□□□□□ -1.97
LTBQ06643 Y_RNA.39-201ENST00000362620 98 ntBASIC2.77□□□□□ -1.97
LTBQ06643 RNY1P16-201ENST00000363063 111 ntBASIC2.77□□□□□ -1.97
LTBQ06643 SNORA51.4-201ENST00000364993 124 ntBASIC2.77□□□□□ -1.97
LTBQ06643 RNU6-933P-201ENST00000384424 107 ntBASIC2.77□□□□□ -1.97
LTBQ06643 SNORD15B-201ENST00000384714 146 ntBASIC2.77□□□□□ -1.97
LTBQ06643 RNU2-68P-201ENST00000410878 191 ntBASIC2.77□□□□□ -1.97
LTBQ06643 RNA5SP508-201ENST00000411327 119 ntBASIC2.77□□□□□ -1.97
LTBQ06643 BMS1P22-201ENST00000414726 313 ntBASIC2.77□□□□□ -1.97
LTBQ06643 AL117339.3-201ENST00000418733 162 ntBASIC2.77□□□□□ -1.97
LTBQ06643 DPH3P2-201ENST00000422618 250 ntBASIC2.77□□□□□ -1.97
LTBQ06643 NUP35P1-201ENST00000422734 947 ntBASIC2.77□□□□□ -1.97
LTBQ06643 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.77□□□□□ -1.97
LTBQ06643 SNRPEP9-201ENST00000436794 238 ntBASIC2.77□□□□□ -1.97
LTBQ06643 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.77□□□□□ -1.97
LTBQ06643 AC112492.4-201ENST00000456549 352 ntBASIC2.77□□□□□ -1.97
LTBQ06643 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.77□□□□□ -1.97
LTBQ06643 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.77□□□□□ -1.97
LTBQ06643 RNU6-635P-201ENST00000516651 102 ntBASIC2.77□□□□□ -1.97
LTBQ06643 RNA5SP291-201ENST00000517222 105 ntBASIC2.77□□□□□ -1.97
LTBQ06643 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.77□□□□□ -1.97
LTBQ06643 GTF3AP2-201ENST00000557014 266 ntBASIC2.77□□□□□ -1.97
LTBQ06643 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.77□□□□□ -1.97
LTBQ06643 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.77□□□□□ -1.97
LTBQ06643 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.77□□□□□ -1.97
LTBQ06643 VN1R107P-201ENST00000601784 209 ntBASIC2.77□□□□□ -1.97
LTBQ06643 AC008121.1-201ENST00000603244 268 ntBASIC2.77□□□□□ -1.97
LTBQ06643 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.77□□□□□ -1.97
LTBQ06643 AL161629.2-201ENST00000615347 275 ntBASIC2.77□□□□□ -1.97
LTBQ06643 AC068831.7-201ENST00000616954 363 ntBASIC2.77□□□□□ -1.97
LTBQ06643 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.77□□□□□ -1.97
LTBQ06643 U4.1-201ENST00000620349 87 ntBASIC2.77□□□□□ -1.97
LTBQ06643 MIR7843-201ENST00000622274 79 ntBASIC2.77□□□□□ -1.97
LTBQ06643 AC138305.3-201ENST00000624988 240 ntBASIC2.77□□□□□ -1.97
LTBQ06643 MAPK10-362ENST00000641864 4484 ntBASIC2.77□□□□□ -1.97
LTBQ06643 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LTBQ06643 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
LTBQ06643 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LTBQ06643 AC073325.2-201ENST00000339545 159 ntBASIC2.76□□□□□ -1.97
LTBQ06643 RNU6-428P-201ENST00000362942 107 ntBASIC2.76□□□□□ -1.97
LTBQ06643 RNU6-238P-201ENST00000363313 106 ntBASIC2.76□□□□□ -1.97
LTBQ06643 Y_RNA.176-201ENST00000363815 109 ntBASIC2.76□□□□□ -1.97
LTBQ06643 SNORA1.3-201ENST00000384676 136 ntBASIC2.76□□□□□ -1.97
LTBQ06643 Y_RNA.574-201ENST00000384766 95 ntBASIC2.76□□□□□ -1.97
LTBQ06643 Y_RNA.577-201ENST00000384794 101 ntBASIC2.76□□□□□ -1.97
LTBQ06643 MIR521-1-201ENST00000384902 87 ntBASIC2.76□□□□□ -1.97
LTBQ06643 RNU6-1077P-201ENST00000410506 102 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AL139281.1-201ENST00000422120 335 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.76□□□□□ -1.97
LTBQ06643 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.76□□□□□ -1.97
LTBQ06643 AC092047.1-201ENST00000424997 240 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.76□□□□□ -1.97
LTBQ06643 Z82210.1-201ENST00000440037 231 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AC010655.3-201ENST00000478818 450 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.76□□□□□ -1.97
LTBQ06643 AC004817.2-201ENST00000561794 651 ntBASIC2.76□□□□□ -1.97
LTBQ06643 MIR4769-201ENST00000584126 77 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.76□□□□□ -1.97
LTBQ06643 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
LTBQ06643 7SK.7-201ENST00000603504 247 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AL645944.1-201ENST00000603857 493 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AC007318.2-201ENST00000620999 243 ntBASIC2.76□□□□□ -1.97
LTBQ06643 AC099506.2-201ENST00000623074 221 ntBASIC2.76□□□□□ -1.97
LTBQ06643 MIR622-201ENST00000638396 96 ntBASIC2.76□□□□□ -1.97
LTBQ06643 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms