Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL138963.2-201ENST00000605137 226 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 AC002044.1-201ENST00000606707 158 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 AP003400.5-201ENST00000624827 617 ntBASIC2.21□□□□□ -2.06
GABPAQ06546 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
GABPAQ06546 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
GABPAQ06546 RNU6-1010P-201ENST00000362757 107 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 RNU6-487P-201ENST00000365430 104 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 RNU6-622P-201ENST00000384272 103 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 MTCO3P40-201ENST00000392516 676 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 RNA5SP390-201ENST00000410191 113 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 RNU2-63P-201ENST00000410792 194 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.2□□□□□ -2.06
GABPAQ06546 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.2□□□□□ -2.06
GABPAQ06546 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.2□□□□□ -2.06
GABPAQ06546 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.2□□□□□ -2.06
GABPAQ06546 AL358453.1-201ENST00000422522 250 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AL445685.2-201ENST00000422551 342 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.2□□□□□ -2.06
GABPAQ06546 RNU7-180P-201ENST00000459240 63 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 Y_RNA.638-201ENST00000459374 113 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 RPL30P12-201ENST00000474666 353 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.2□□□□□ -2.06
GABPAQ06546 MTCYBP40-201ENST00000509390 1135 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AF213884.2-201ENST00000510417 903 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.2□□□□□ -2.06
GABPAQ06546 AC107393.1-201ENST00000512403 346 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 RNU6-377P-201ENST00000515965 102 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 RNU2-53P-201ENST00000516257 147 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.2□□□□□ -2.06
GABPAQ06546 AL133241.1-201ENST00000556832 487 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.2□□□□□ -2.06
GABPAQ06546 RPL30P11-203ENST00000598995 310 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AL355297.2-201ENST00000604792 129 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 BNIP3P10-201ENST00000605360 577 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 U2.17-201ENST00000611454 95 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 uc_338.15-201ENST00000615470 191 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AC009233.1-201ENST00000616477 371 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 uc_338.34-201ENST00000617467 174 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AC068792.1-201ENST00000621354 417 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AC097372.5-201ENST00000623665 376 ntBASIC2.2□□□□□ -2.06
GABPAQ06546 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.2□□□□□ -2.06
GABPAQ06546 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
GABPAQ06546 ZNF72P-201ENST00000425869 1908 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 RNU6-1085P-201ENST00000363576 107 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 RNA5SP213-201ENST00000391031 106 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 MIR1294-201ENST00000408503 142 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
GABPAQ06546 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.19□□□□□ -2.06
GABPAQ06546 AL121601.2-201ENST00000438019 707 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 AC016691.1-201ENST00000441321 413 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.19□□□□□ -2.06
GABPAQ06546 AL031659.1-201ENST00000447075 539 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
GABPAQ06546 AC008526.1-201ENST00000509149 338 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 SNORA40.12-201ENST00000516329 111 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.19□□□□□ -2.06
GABPAQ06546 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.19□□□□□ -2.06
GABPAQ06546 AP001893.2-201ENST00000526949 202 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 AC104383.1-201ENST00000530297 370 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.19□□□□□ -2.06
GABPAQ06546 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.19□□□□□ -2.06
GABPAQ06546 AC090897.2-201ENST00000581715 130 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 AC002984.1-201ENST00000591692 448 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.19□□□□□ -2.06
GABPAQ06546 AP001330.5-201ENST00000607176 411 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
GABPAQ06546 AL353997.5-201ENST00000618886 171 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 U4.7-201ENST00000638126 106 ntBASIC2.19□□□□□ -2.06
GABPAQ06546 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
GABPAQ06546 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
GABPAQ06546 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
GABPAQ06546 RNU1-72P-201ENST00000362976 153 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 RNU6-1322P-201ENST00000364309 107 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 Y_RNA.318-201ENST00000365131 97 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 SNORA69-201ENST00000383895 132 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 Y_RNA.399-201ENST00000383955 105 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 RNU6-1032P-201ENST00000384100 107 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 Y_RNA.481-201ENST00000384373 102 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 MIR186-201ENST00000384988 86 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
GABPAQ06546 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 MORF4L1P6-201ENST00000418771 268 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 AC008267.5-201ENST00000424928 265 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 WARS2P1-201ENST00000429678 537 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.18□□□□□ -2.06
GABPAQ06546 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.18□□□□□ -2.06
GABPAQ06546 CYP2C59P-201ENST00000457790 269 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.18□□□□□ -2.06
GABPAQ06546 RNU7-167P-201ENST00000459160 62 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 AC079140.5-201ENST00000507882 310 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 RNA5SP401-201ENST00000515920 127 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
GABPAQ06546 AC109329.1-201ENST00000518744 317 ntBASIC2.18□□□□□ -2.06
GABPAQ06546 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms