Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 CCDC58P2-201ENST00000417131 366 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU4-54P-201ENST00000516428 129 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AC087897.1-201ENST00000550134 156 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AL136520.1-202ENST00000555494 763 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC091057.3-201ENST00000602684 733 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 Z98751.3-201ENST00000604447 521 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC040896.1-201ENST00000613819 479 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 MIR8063-201ENST00000621930 81 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AC114482.1-201ENST00000418010 247 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.02□□□□□ -2.41
HSPG2P98160 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.02□□□□□ -2.41
HSPG2P98160 MTATP6P23-201ENST00000440153 476 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.02□□□□□ -2.41
HSPG2P98160 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.02□□□□□ -2.41
HSPG2P98160 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.02□□□□□ -2.41
HSPG2P98160 AC005261.5-201ENST00000596280 355 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AP001429.1-201ENST00000602568 530 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AP003465.2-201ENST00000602571 373 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AP001981.2-201ENST00000603241 418 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AL513534.2-201ENST00000603836 250 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 RMST_4.1-201ENST00000616886 107 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AL109620.1-201ENST00000618738 1197 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 MTND5P31-201ENST00000419366 1374 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.02□□□□□ -2.41
HSPG2P98160 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 TAF13P2-201ENST00000416876 286 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.02□□□□□ -2.41
HSPG2P98160 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.02□□□□□ -2.41
HSPG2P98160 RNU1-131P-201ENST00000458943 161 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 RPL32P14-201ENST00000463196 378 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC098869.1-201ENST00000481627 292 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC093249.1-201ENST00000567049 203 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.02□□□□□ -2.41
HSPG2P98160 AL355598.1-201ENST00000604169 202 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC107952.2-201ENST00000606048 486 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC092354.1-201ENST00000606057 376 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 OR5AK4P-201ENST00000635912 903 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 LINC02555-201ENST00000563933 1951 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 MIR224-201ENST00000384889 81 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 MIR605-201ENST00000385078 83 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 DHFRP6-201ENST00000401776 268 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 RPS26P42-201ENST00000413485 326 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.02□□□□□ -2.41
HSPG2P98160 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AP001324.2-201ENST00000461163 319 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 MTCYBP43-201ENST00000513621 740 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.02□□□□□ -2.41
HSPG2P98160 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.02□□□□□ -2.41
HSPG2P98160 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.02□□□□□ -2.41
HSPG2P98160 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.02□□□□□ -2.41
HSPG2P98160 AC025449.1-201ENST00000603896 529 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 AC107075.1-201ENST00000613695 314 ntBASIC-0.02□□□□□ -2.41
HSPG2P98160 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL355796.1-201ENST00000406706 323 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.03□□□□□ -2.41
HSPG2P98160 AC099677.2-201ENST00000436385 175 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 FABP5P4-201ENST00000437203 171 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 RPL7P55-201ENST00000450522 746 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 RPS27AP8-201ENST00000452665 445 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC114982.2-201ENST00000461396 358 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL049874.1-201ENST00000489560 388 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.03□□□□□ -2.41
HSPG2P98160 TRAV32-201ENST00000553993 340 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.03□□□□□ -2.41
HSPG2P98160 AL158211.4-201ENST00000606988 584 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL590240.4-201ENST00000616908 390 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 MIR365A-201ENST00000362260 87 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AF228730.1-201ENST00000397972 663 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 MIR1262-201ENST00000408276 93 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.03□□□□□ -2.41
HSPG2P98160 AC233266.1-201ENST00000454518 96 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.03□□□□□ -2.41
HSPG2P98160 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.03□□□□□ -2.41
HSPG2P98160 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.03□□□□□ -2.41
HSPG2P98160 MIR4782-201ENST00000577987 79 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC016252.1-201ENST00000609721 474 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC242852.1-201ENST00000612151 96 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AL591926.4-201ENST00000616895 298 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC073349.3-201ENST00000617616 186 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 AC244015.1-201ENST00000622301 99 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 SNORA36.1-201ENST00000363424 132 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 MIR587-201ENST00000384845 96 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 RNU6-910P-201ENST00000390844 107 ntBASIC-0.03□□□□□ -2.41
HSPG2P98160 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms