Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
CLDN18P56856 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLDN18P56856 RNU4-13P-201ENST00000364019 141 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.35□□□□□ -2.19
CLDN18P56856 MTND4P20-201ENST00000424125 869 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.35□□□□□ -2.19
CLDN18P56856 AL606662.1-201ENST00000445763 553 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.35□□□□□ -2.19
CLDN18P56856 AC010409.1-201ENST00000487382 476 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 AC104806.1-201ENST00000508720 308 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.35□□□□□ -2.19
CLDN18P56856 RNU6-377P-201ENST00000515965 102 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.35□□□□□ -2.19
CLDN18P56856 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.35□□□□□ -2.19
CLDN18P56856 MIR5094-201ENST00000578766 85 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 AL034555.1-201ENST00000604816 211 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 AC005014.3-201ENST00000605985 190 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CLDN18P56856 uc_338.5-201ENST00000611839 155 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 AL133173.2-201ENST00000614270 90 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 AC092140.2-201ENST00000618027 521 ntBASIC1.35□□□□□ -2.19
CLDN18P56856 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CLDN18P56856 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CLDN18P56856 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CLDN18P56856 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CLDN18P56856 RNU5E-5P-201ENST00000365379 116 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 RNU6-438P-201ENST00000365561 103 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 RNU6-26P-201ENST00000383985 107 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 Y_RNA.576-201ENST00000384781 102 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 RPL23AP32-201ENST00000395315 459 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 MIR1267-201ENST00000408723 78 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 RNU6-174P-201ENST00000410406 106 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 MTATP6P19-201ENST00000413797 659 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 RPL21P111-201ENST00000418453 477 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 ART2BP-201ENST00000453501 499 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AC114801.2-201ENST00000503825 781 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.34□□□□□ -2.19
CLDN18P56856 AC022616.3-201ENST00000523940 148 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 COPS8P3-201ENST00000526024 482 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.34□□□□□ -2.19
CLDN18P56856 DNAJC19P9-201ENST00000555084 351 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 HMGB1P33-201ENST00000563485 527 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.34□□□□□ -2.19
CLDN18P56856 AC073539.2-201ENST00000597113 165 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AC112191.3-201ENST00000604371 277 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AC018889.1-201ENST00000605372 397 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AL121992.2-201ENST00000606262 256 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AP000240.1-201ENST00000609910 452 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AL512598.1-201ENST00000610158 273 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 AL078595.3-201ENST00000623815 1166 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 SNORD98-201ENST00000636377 67 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 U4.7-201ENST00000638126 106 ntBASIC1.34□□□□□ -2.19
CLDN18P56856 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CLDN18P56856 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
CLDN18P56856 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLDN18P56856 SNORD113-6-201ENST00000363345 75 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 RNU4-56P-201ENST00000364700 142 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 Y_RNA.595-201ENST00000410403 105 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 MTCO3P41-201ENST00000414801 328 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AL356583.2-201ENST00000426536 280 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.33□□□□□ -2.2
CLDN18P56856 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.33□□□□□ -2.2
CLDN18P56856 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AC022447.4-201ENST00000504053 364 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.33□□□□□ -2.2
CLDN18P56856 AP005435.4-201ENST00000529514 284 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AC022878.1-201ENST00000530684 149 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AC005771.1-201ENST00000585581 349 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AL590229.1-201ENST00000603497 542 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AC104073.3-201ENST00000610942 955 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AC138749.5-201ENST00000611461 208 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 AC116165.2-201ENST00000616705 206 ntBASIC1.33□□□□□ -2.2
CLDN18P56856 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CLDN18P56856 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CLDN18P56856 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLDN18P56856 Y_RNA.22-201ENST00000362492 102 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU4-15P-201ENST00000362613 141 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-37P-201ENST00000362692 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-11P-201ENST00000364234 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-25P-201ENST00000383873 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-1-201ENST00000383898 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-48P-201ENST00000384161 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-36P-201ENST00000384172 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-4P-201ENST00000384205 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-5P-201ENST00000384238 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-3P-201ENST00000384314 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-16P-201ENST00000384385 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-45P-201ENST00000384471 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-15P-201ENST00000384534 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-2-201ENST00000384627 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-29P-201ENST00000384637 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-9-201ENST00000384776 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-33P-201ENST00000384793 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-293P-201ENST00000411259 106 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms