Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC104237.2-201ENST00000612456 443 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 AC025253.1-201ENST00000613623 543 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 AC097372.5-201ENST00000623665 376 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 AC018692.3-201ENST00000623929 123 ntBASIC2.79□□□□□ -1.96
NR1H2P55055 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NR1H2P55055 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.79□□□□□ -1.96
NR1H2P55055 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NR1H2P55055 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NR1H2P55055 RNU6-95P-201ENST00000384697 107 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 AC003685.2-201ENST00000422795 395 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.78□□□□□ -1.96
NR1H2P55055 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.78□□□□□ -1.96
NR1H2P55055 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.78□□□□□ -1.96
NR1H2P55055 RPL39P29-201ENST00000447779 157 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.78□□□□□ -1.96
NR1H2P55055 RNU6-1037P-201ENST00000459571 107 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 AC130509.1-201ENST00000464158 433 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.78□□□□□ -1.96
NR1H2P55055 SNORA25.11-201ENST00000515935 105 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.78□□□□□ -1.96
NR1H2P55055 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.78□□□□□ -1.96
NR1H2P55055 AC009314.1-201ENST00000603871 304 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.78□□□□□ -1.96
NR1H2P55055 MIR7106-201ENST00000612419 65 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 MIR622-201ENST00000638396 96 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.78□□□□□ -1.96
NR1H2P55055 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.78□□□□□ -1.96
NR1H2P55055 RNU6-1210P-201ENST00000363775 107 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 RNU6-336P-201ENST00000364891 107 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 SNORA7.4-201ENST00000384249 137 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 MIR544A-201ENST00000384855 91 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 MIR592-201ENST00000384959 97 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 MIR548F5-201ENST00000408421 86 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 RNU6-293P-201ENST00000411259 106 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.77□□□□□ -1.97
NR1H2P55055 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.77□□□□□ -1.97
NR1H2P55055 AL139396.1-201ENST00000421137 167 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.77□□□□□ -1.97
NR1H2P55055 MTND1P11-201ENST00000456661 876 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 AC090525.1-201ENST00000479116 478 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 MTCO1P29-201ENST00000496868 288 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 AC105029.1-201ENST00000520250 669 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.77□□□□□ -1.97
NR1H2P55055 HPRT1P3-201ENST00000539521 576 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 RPL30P11-203ENST00000598995 310 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 AL670379.2-201ENST00000604983 252 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 AL033523.1-201ENST00000605153 153 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 U4atac.1-201ENST00000618345 95 ntBASIC2.77□□□□□ -1.97
NR1H2P55055 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
NR1H2P55055 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
NR1H2P55055 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NR1H2P55055 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NR1H2P55055 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.76□□□□□ -1.97
NR1H2P55055 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NR1H2P55055 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
NR1H2P55055 RNU6-212P-201ENST00000362642 104 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 Y_RNA.263-201ENST00000364659 114 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 Y_RNA.356-201ENST00000365475 113 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 SNORA44-201ENST00000384584 132 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AL139095.1-201ENST00000404326 391 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 MIR548K-201ENST00000408406 116 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AC074085.1-201ENST00000413598 418 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.76□□□□□ -1.97
NR1H2P55055 AL645568.3-201ENST00000433683 316 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.76□□□□□ -1.97
NR1H2P55055 MTND1P17-201ENST00000448961 204 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 RNU7-26P-201ENST00000458980 63 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 RNU7-187P-201ENST00000458985 68 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AC140059.1-201ENST00000489238 361 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 RPS27P27-201ENST00000498779 255 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 MTND5P5-201ENST00000503764 376 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 RPL39P5-202ENST00000512505 151 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 RN7SKP24-201ENST00000515888 284 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 Y_RNA.691-201ENST00000516611 103 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AC009812.2-201ENST00000517657 457 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 TRAV32-201ENST00000553993 340 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.76□□□□□ -1.97
NR1H2P55055 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.76□□□□□ -1.97
NR1H2P55055 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 MIR2682-201ENST00000580305 110 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 LARP7P1-201ENST00000605576 316 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 AC090115.4-201ENST00000609970 188 ntBASIC2.76□□□□□ -1.97
NR1H2P55055 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
NR1H2P55055 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
NR1H2P55055 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
NR1H2P55055 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
NR1H2P55055 SNORA25.6-201ENST00000364121 118 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 Y_RNA.529-201ENST00000384586 119 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 SNORD15B-201ENST00000384714 146 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 MIR181A2-201ENST00000384863 110 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 AL360182.1-201ENST00000397433 468 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NR1H2P55055 CBX3P9-201ENST00000402326 552 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.75□□□□□ -1.97
NR1H2P55055 NCOR1P3-201ENST00000420479 303 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.75□□□□□ -1.97
NR1H2P55055 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NR1H2P55055 AL161788.1-201ENST00000441805 169 ntBASIC2.75□□□□□ -1.97
NR1H2P55055 AC243964.1-201ENST00000441814 261 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms