Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC092954.2-201ENST00000609103 430 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 uc_338.15-201ENST00000615470 191 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 MIR5739-201ENST00000619803 80 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 AC007792.1-201ENST00000623023 402 ntBASIC2.45□□□□□ -2.02
LIMK1P53667 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.45□□□□□ -2.02
LIMK1P53667 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
LIMK1P53667 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LIMK1P53667 SNORD114-30-201ENST00000364448 72 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 RNU6-487P-201ENST00000365430 104 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 RNU1-57P-201ENST00000384491 166 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.44□□□□□ -2.02
LIMK1P53667 AC011816.1-201ENST00000441346 546 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.44□□□□□ -2.02
LIMK1P53667 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.44□□□□□ -2.02
LIMK1P53667 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.44□□□□□ -2.02
LIMK1P53667 AC090515.1-201ENST00000465295 476 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 RPL7P43-201ENST00000478876 753 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 MTCYBP40-201ENST00000509390 1135 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 RNU7-193P-201ENST00000516723 65 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 SNORA25.17-201ENST00000517184 124 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.44□□□□□ -2.02
LIMK1P53667 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.44□□□□□ -2.02
LIMK1P53667 AC092747.3-201ENST00000603769 301 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 APOOP1-201ENST00000604695 592 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 AC123912.5-201ENST00000605470 343 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 YWHAEP7-203ENST00000622054 312 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 U4.7-201ENST00000638126 106 ntBASIC2.44□□□□□ -2.02
LIMK1P53667 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
LIMK1P53667 RNU6-1159P-201ENST00000362933 107 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 RNU6-1215P-201ENST00000384441 102 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 RNU6-1106P-201ENST00000390845 107 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 SNORD56-201ENST00000413522 71 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 USP9YP27-201ENST00000418455 438 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.43□□□□□ -2.02
LIMK1P53667 MTND3P21-201ENST00000433774 331 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 MTND3P16-201ENST00000452205 344 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 SNRPGP7-201ENST00000469016 106 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 AC068781.1-201ENST00000488231 618 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 CCDC34P1-201ENST00000507441 517 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 AK3P2-201ENST00000507976 429 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 RNU6-189P-201ENST00000516120 101 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 RNU6-835P-201ENST00000516974 104 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.43□□□□□ -2.02
LIMK1P53667 CYCSP27-201ENST00000527643 293 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 MTCO3P23-201ENST00000561363 289 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 AC026464.5-201ENST00000562497 722 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 AC136619.2-201ENST00000563361 631 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 VN1R80P-201ENST00000597126 338 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 RPL30P11-203ENST00000598995 310 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 AC107304.1-201ENST00000604229 296 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.43□□□□□ -2.02
LIMK1P53667 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.43□□□□□ -2.02
LIMK1P53667 AC016717.2-201ENST00000609089 5141 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
LIMK1P53667 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.42□□□□□ -2.02
LIMK1P53667 RNU6-1010P-201ENST00000362757 107 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 Y_RNA.164-201ENST00000363709 102 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 RNU1-91P-201ENST00000364746 163 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 RNA5SP240-201ENST00000365355 128 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 RNU6-38P-201ENST00000384085 107 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 MIR544A-201ENST00000384855 91 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 MIR186-201ENST00000384988 86 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 MIR181A1-201ENST00000385026 110 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 RNA5SP210-201ENST00000391034 120 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 RNU6-1068P-201ENST00000410958 103 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 RNU6-293P-201ENST00000411259 106 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 POLHP1-201ENST00000411806 470 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.42□□□□□ -2.02
LIMK1P53667 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.42□□□□□ -2.02
LIMK1P53667 RPL39P29-201ENST00000447779 157 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.42□□□□□ -2.02
LIMK1P53667 RNU6-333P-201ENST00000459117 107 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AP001025.1-201ENST00000486139 332 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AC091885.1-201ENST00000506658 268 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.42□□□□□ -2.02
LIMK1P53667 RNU2-53P-201ENST00000516257 147 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.42□□□□□ -2.02
LIMK1P53667 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.42□□□□□ -2.02
LIMK1P53667 CENPUP1-201ENST00000526649 1202 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AC090897.2-201ENST00000581715 130 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 MIR4424-201ENST00000585257 86 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.42□□□□□ -2.02
LIMK1P53667 AL355297.2-201ENST00000604792 129 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AL670379.2-201ENST00000604983 252 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AL138963.2-201ENST00000605137 226 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 AL137847.3-201ENST00000611521 109 ntBASIC2.42□□□□□ -2.02
LIMK1P53667 RNU6-529P-201ENST00000363383 104 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 U3.13-201ENST00000364804 214 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 RNU6-622P-201ENST00000384272 103 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 RNU1-148P-201ENST00000384472 162 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LIMK1P53667 ARL5AP1-201ENST00000418991 388 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 MTCO1P20-201ENST00000425366 358 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LIMK1P53667 MTND1P34-201ENST00000438556 671 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms