Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AK3P2-201ENST00000507976 429 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AC025465.4-201ENST00000513422 638 ntBASIC2.42□□□□□ -2.02
PDX1P52945 SMURF2P1-201ENST00000514992 481 ntBASIC2.42□□□□□ -2.02
PDX1P52945 RNU6-864P-201ENST00000516256 108 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AC109479.2-201ENST00000517842 174 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.42□□□□□ -2.02
PDX1P52945 AP000889.2-201ENST00000532684 490 ntBASIC2.42□□□□□ -2.02
PDX1P52945 TRAV32-201ENST00000553993 340 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.42□□□□□ -2.02
PDX1P52945 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.42□□□□□ -2.02
PDX1P52945 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.42□□□□□ -2.02
PDX1P52945 MIR4765-201ENST00000585007 77 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.42□□□□□ -2.02
PDX1P52945 RPL23AP88-201ENST00000605759 454 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.42□□□□□ -2.02
PDX1P52945 AC099654.14-201ENST00000638599 341 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.42□□□□□ -2.02
PDX1P52945 HAUS6P2-201ENST00000433254 2404 ntBASIC2.41□□□□□ -2.02
PDX1P52945 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.41□□□□□ -2.02
PDX1P52945 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.41□□□□□ -2.02
PDX1P52945 RNU6-527P-201ENST00000363425 104 ntBASIC2.41□□□□□ -2.02
PDX1P52945 RNU6-487P-201ENST00000365430 104 ntBASIC2.41□□□□□ -2.02
PDX1P52945 RNU6-692P-201ENST00000384496 107 ntBASIC2.41□□□□□ -2.02
PDX1P52945 RPS29P13-201ENST00000402041 169 ntBASIC2.41□□□□□ -2.02
PDX1P52945 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
PDX1P52945 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.41□□□□□ -2.02
PDX1P52945 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.41□□□□□ -2.02
PDX1P52945 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.41□□□□□ -2.02
PDX1P52945 UBL5P3-201ENST00000475112 231 ntBASIC2.41□□□□□ -2.02
PDX1P52945 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.41□□□□□ -2.02
PDX1P52945 RNU6-1088P-201ENST00000516850 104 ntBASIC2.41□□□□□ -2.02
PDX1P52945 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.41□□□□□ -2.02
PDX1P52945 AP001094.1-201ENST00000579805 193 ntBASIC2.41□□□□□ -2.02
PDX1P52945 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.41□□□□□ -2.02
PDX1P52945 MIR3199-1-201ENST00000582434 88 ntBASIC2.41□□□□□ -2.02
PDX1P52945 AC019159.1-201ENST00000605094 187 ntBASIC2.41□□□□□ -2.02
PDX1P52945 AL138726.1-201ENST00000614873 333 ntBASIC2.41□□□□□ -2.02
PDX1P52945 AL133216.2-202ENST00000634512 349 ntBASIC2.41□□□□□ -2.02
PDX1P52945 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDX1P52945 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PDX1P52945 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.4□□□□□ -2.02
PDX1P52945 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.4□□□□□ -2.02
PDX1P52945 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
PDX1P52945 Y_RNA.40-201ENST00000362645 93 ntBASIC2.4□□□□□ -2.03
PDX1P52945 Y_RNA.212-201ENST00000364177 102 ntBASIC2.4□□□□□ -2.03
PDX1P52945 SNORD114-30-201ENST00000364448 72 ntBASIC2.4□□□□□ -2.03
PDX1P52945 MIR218-1-201ENST00000384999 110 ntBASIC2.4□□□□□ -2.03
PDX1P52945 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PDX1P52945 RN7SKP223-201ENST00000410582 62 ntBASIC2.4□□□□□ -2.03
PDX1P52945 RNU6-293P-201ENST00000411259 106 ntBASIC2.4□□□□□ -2.03
PDX1P52945 RPL30P4-201ENST00000429309 333 ntBASIC2.4□□□□□ -2.03
PDX1P52945 AC243964.1-201ENST00000441814 261 ntBASIC2.4□□□□□ -2.03
PDX1P52945 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.4□□□□□ -2.03
PDX1P52945 AMD1P1-201ENST00000457220 922 ntBASIC2.4□□□□□ -2.03
PDX1P52945 AL441985.1-201ENST00000457727 251 ntBASIC2.4□□□□□ -2.03
PDX1P52945 snoU13.15-201ENST00000459407 104 ntBASIC2.4□□□□□ -2.03
PDX1P52945 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
PDX1P52945 RPL36AP48-201ENST00000485521 314 ntBASIC2.4□□□□□ -2.03
PDX1P52945 TRBVA-201ENST00000498804 316 ntBASIC2.4□□□□□ -2.03
PDX1P52945 SNORA20.3-201ENST00000516880 132 ntBASIC2.4□□□□□ -2.03
PDX1P52945 CKS1BP7-201ENST00000522230 235 ntBASIC2.4□□□□□ -2.03
PDX1P52945 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.4□□□□□ -2.03
PDX1P52945 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
PDX1P52945 AC079598.5-201ENST00000547460 117 ntBASIC2.4□□□□□ -2.03
PDX1P52945 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.4□□□□□ -2.03
PDX1P52945 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.4□□□□□ -2.03
PDX1P52945 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.4□□□□□ -2.03
PDX1P52945 MIR4742-201ENST00000581069 85 ntBASIC2.4□□□□□ -2.03
PDX1P52945 AC023043.2-201ENST00000589678 1026 ntBASIC2.4□□□□□ -2.03
PDX1P52945 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.4□□□□□ -2.03
PDX1P52945 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.4□□□□□ -2.03
PDX1P52945 RNU6-91P-201ENST00000607774 107 ntBASIC2.4□□□□□ -2.03
PDX1P52945 MIR7843-201ENST00000622274 79 ntBASIC2.4□□□□□ -2.03
PDX1P52945 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.4□□□□□ -2.03
PDX1P52945 AC241585.2-209ENST00000638217 143 ntBASIC2.4□□□□□ -2.03
PDX1P52945 Z75746.1-201ENST00000440243 2080 ntBASIC2.4□□□□□ -2.03
PDX1P52945 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PDX1P52945 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.39□□□□□ -2.03
PDX1P52945 Y_RNA.72-201ENST00000362894 103 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RNU1-72P-201ENST00000362976 153 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RNU1-109P-201ENST00000383960 147 ntBASIC2.39□□□□□ -2.03
PDX1P52945 FO393413.1-201ENST00000402892 195 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RPL21P111-201ENST00000418453 477 ntBASIC2.39□□□□□ -2.03
PDX1P52945 MTCO3P46-201ENST00000425787 232 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AL591043.1-201ENST00000432461 424 ntBASIC2.39□□□□□ -2.03
PDX1P52945 SNAP23P1-201ENST00000433229 246 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RPL7P12-201ENST00000446719 750 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.39□□□□□ -2.03
PDX1P52945 AC012308.1-201ENST00000451232 178 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RNU7-187P-201ENST00000458985 68 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RPL30P12-201ENST00000474666 353 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AC234781.5-201ENST00000508429 271 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AC008526.1-201ENST00000509149 338 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RNU6-237P-201ENST00000515985 71 ntBASIC2.39□□□□□ -2.03
PDX1P52945 RN7SKP256-201ENST00000517201 314 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.39□□□□□ -2.03
PDX1P52945 COX6CP5-201ENST00000527162 228 ntBASIC2.39□□□□□ -2.03
PDX1P52945 AC087241.2-201ENST00000535801 324 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms