Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 Y_RNA.384-201ENST00000383909 102 ntBASIC2.79□□□□□ -1.96
PTPN9P43378 RNU6-1083P-201ENST00000384022 107 ntBASIC2.79□□□□□ -1.96
PTPN9P43378 MIR517A-201ENST00000385001 87 ntBASIC2.79□□□□□ -1.96
PTPN9P43378 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.79□□□□□ -1.96
PTPN9P43378 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.79□□□□□ -1.96
PTPN9P43378 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN9P43378 RPL23AP58-201ENST00000440453 469 ntBASIC2.79□□□□□ -1.96
PTPN9P43378 AC243964.1-201ENST00000441814 261 ntBASIC2.79□□□□□ -1.96
PTPN9P43378 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.79□□□□□ -1.96
PTPN9P43378 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN9P43378 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.79□□□□□ -1.96
PTPN9P43378 RN7SKP132-201ENST00000516001 208 ntBASIC2.79□□□□□ -1.96
PTPN9P43378 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN9P43378 EIF4BP1-201ENST00000554881 351 ntBASIC2.79□□□□□ -1.96
PTPN9P43378 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.79□□□□□ -1.96
PTPN9P43378 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.79□□□□□ -1.96
PTPN9P43378 AC011471.1-201ENST00000585766 187 ntBASIC2.79□□□□□ -1.96
PTPN9P43378 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTPN9P43378 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTPN9P43378 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PTPN9P43378 AL109809.4-201ENST00000603520 2185 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
PTPN9P43378 RNU6-1010P-201ENST00000362757 107 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 Y_RNA.61-201ENST00000362835 102 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 SNORD56.1-201ENST00000362913 68 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 RNU4-73P-201ENST00000363164 141 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 Y_RNA.151-201ENST00000363566 112 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 RNU6-1317P-201ENST00000364582 104 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AL513475.1-201ENST00000406602 315 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.78□□□□□ -1.96
PTPN9P43378 AC018437.1-201ENST00000492214 406 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.78□□□□□ -1.96
PTPN9P43378 PTP4A1P4-201ENST00000512479 322 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 MRPS36P2-201ENST00000512569 299 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 RNU6-612P-201ENST00000516909 102 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AP005902.1-201ENST00000521358 186 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AL355375.2-201ENST00000574825 175 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 RPS15AP11-201ENST00000594193 385 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AC010620.2-201ENST00000600135 313 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AC078795.3-201ENST00000602913 472 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AP001836.1-201ENST00000604675 523 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AC018462.2-201ENST00000605375 395 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AC016727.1-205ENST00000605437 569 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PTPN9P43378 AC019193.3-201ENST00000609144 554 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 MIR8076-201ENST00000611401 83 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 MIR6128-201ENST00000615528 109 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AC006386.2-201ENST00000624491 75 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 AC012005.1-201ENST00000624575 75 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.78□□□□□ -1.96
PTPN9P43378 MTND5P30-201ENST00000452896 1731 ntBASIC2.78□□□□□ -1.96
PTPN9P43378 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.78□□□□□ -1.96
PTPN9P43378 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PTPN9P43378 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PTPN9P43378 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTPN9P43378 AC002543.1-201ENST00000299783 1954 ntBASIC2.78□□□□□ -1.97
PTPN9P43378 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
PTPN9P43378 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.77□□□□□ -1.97
PTPN9P43378 AL365361.1-201ENST00000566942 3481 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PTPN9P43378 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PTPN9P43378 RNU6-227P-201ENST00000362865 103 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 SNORD21-201ENST00000383953 95 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 Y_RNA.509-201ENST00000384506 99 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 RNU6-601P-201ENST00000384540 107 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PTPN9P43378 AL356057.3-201ENST00000402607 340 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 AL139095.1-201ENST00000404326 391 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 CYCSP48-201ENST00000417124 323 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.77□□□□□ -1.97
PTPN9P43378 MTND3P23-201ENST00000431980 347 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 AL133396.1-201ENST00000432048 687 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 MICF-203ENST00000432679 129 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.77□□□□□ -1.97
PTPN9P43378 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PTPN9P43378 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.77□□□□□ -1.97
PTPN9P43378 RPS29P27-201ENST00000463711 170 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.77□□□□□ -1.97
PTPN9P43378 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.77□□□□□ -1.97
PTPN9P43378 MIR7106-201ENST00000612419 65 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 AC241585.2-209ENST00000638217 143 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.77□□□□□ -1.97
PTPN9P43378 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PTPN9P43378 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PTPN9P43378 AC010329.5-201ENST00000623497 2174 ntBASIC2.77□□□□□ -1.97
PTPN9P43378 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN9P43378 AC138915.1-201ENST00000565427 1685 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 AL359854.1-201ENST00000614203 1594 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 SNORA80A-201ENST00000363922 136 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 SNORA68.1-201ENST00000364537 132 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 U8.8-201ENST00000365399 135 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 RNU6-1297P-201ENST00000384415 104 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 RNU6-1222P-201ENST00000384615 107 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 MIR23A-201ENST00000385245 73 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN9P43378 RPL23AP95-201ENST00000426806 265 ntBASIC2.76□□□□□ -1.97
PTPN9P43378 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN9P43378 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms