Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.57□□□□□ -2.16
TNFSF9P41273 AL136380.1-201ENST00000447970 162 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AL353752.1-201ENST00000454946 260 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 BET1P1-201ENST00000482276 359 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
TNFSF9P41273 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.57□□□□□ -2.16
TNFSF9P41273 RNU2-44P-201ENST00000516795 194 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 RNU1-92P-201ENST00000517017 135 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AC026407.1-201ENST00000518369 204 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.57□□□□□ -2.16
TNFSF9P41273 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.57□□□□□ -2.16
TNFSF9P41273 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.57□□□□□ -2.16
TNFSF9P41273 AC078795.2-201ENST00000602835 1252 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AC063943.3-201ENST00000615562 356 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AL132822.1-201ENST00000617063 513 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AC136475.10-201ENST00000620253 385 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 AC007792.1-201ENST00000623023 402 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
TNFSF9P41273 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TNFSF9P41273 AL354685.2-201ENST00000448218 1447 ntBASIC1.57□□□□□ -2.16
TNFSF9P41273 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
TNFSF9P41273 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TNFSF9P41273 AL391987.6-201ENST00000305671 199 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 RNU6-384P-201ENST00000364900 104 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.56□□□□□ -2.16
TNFSF9P41273 SNORA40.3-201ENST00000390964 122 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 RNU2-39P-201ENST00000410604 198 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 RNU6-248P-201ENST00000410720 107 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.56□□□□□ -2.16
TNFSF9P41273 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.56□□□□□ -2.16
TNFSF9P41273 BX295541.1-201ENST00000417774 250 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 MTND4P20-201ENST00000424125 869 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AC092447.3-201ENST00000426027 686 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 RPL31P35-201ENST00000431058 377 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AC009961.2-201ENST00000435771 251 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 SNRPGP9-201ENST00000456025 225 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 SNRPFP4-201ENST00000456366 242 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AC117522.1-201ENST00000509821 380 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFSF9P41273 Y_RNA.672-201ENST00000516289 104 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AC090572.1-201ENST00000519251 160 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFSF9P41273 AC090578.1-201ENST00000604955 591 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 RMST_6.1-201ENST00000611980 203 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 MIR8070-201ENST00000616510 88 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AL157786.1-207ENST00000627771 695 ntBASIC1.56□□□□□ -2.16
TNFSF9P41273 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.56□□□□□ -2.16
TNFSF9P41273 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TNFSF9P41273 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TNFSF9P41273 MIR29B2-201ENST00000385055 81 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 RPL23AP32-201ENST00000395315 459 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AF228730.1-201ENST00000397972 663 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 Y_RNA.598-201ENST00000410480 95 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 SNORD56-201ENST00000413522 71 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 VN1R36P-201ENST00000414936 291 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 RPL21P90-201ENST00000415692 466 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFSF9P41273 MTCO2P34-201ENST00000421994 607 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 MTCYBP5-201ENST00000423752 1135 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 RPS24P1-201ENST00000438550 371 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFSF9P41273 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.55□□□□□ -2.16
TNFSF9P41273 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFSF9P41273 Y_RNA.675-201ENST00000516389 149 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.55□□□□□ -2.16
TNFSF9P41273 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFSF9P41273 AP005435.4-201ENST00000529514 284 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AC007834.2-201ENST00000536310 343 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFSF9P41273 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFSF9P41273 MIR4713-201ENST00000582691 75 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AC008521.1-201ENST00000587471 187 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.55□□□□□ -2.16
TNFSF9P41273 AL022345.1-201ENST00000607292 135 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AC008250.2-201ENST00000615261 205 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AL603755.1-201ENST00000619504 163 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 AC026585.1-201ENST00000619582 524 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.55□□□□□ -2.16
TNFSF9P41273 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
TNFSF9P41273 RNU6-1164P-201ENST00000364428 107 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 RNU6-61P-201ENST00000365528 109 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 RNU6-348P-201ENST00000384386 107 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 MIR1-2-201ENST00000384961 85 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.54□□□□□ -2.16
TNFSF9P41273 RNA5SP501-201ENST00000410990 112 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 OR9R1P-201ENST00000412200 877 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 HMGN1P14-201ENST00000412459 517 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 EEF1A1P40-201ENST00000412883 573 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 USP9YP18-201ENST00000425912 695 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.54□□□□□ -2.16
TNFSF9P41273 USP9YP29-201ENST00000445112 563 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 AL360271.2-201ENST00000447710 161 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFSF9P41273 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms