Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC011476.5-201ENST00000615594 130 ntBASIC3.27□□□□□ -1.89
CD40P25942 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.27□□□□□ -1.89
CD40P25942 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.27□□□□□ -1.89
CD40P25942 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD40P25942 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.27□□□□□ -1.89
CD40P25942 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD40P25942 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CD40P25942 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD40P25942 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD40P25942 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.26□□□□□ -1.89
CD40P25942 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
CD40P25942 RNU6-655P-201ENST00000362858 107 ntBASIC3.26□□□□□ -1.89
CD40P25942 Y_RNA.105-201ENST00000363182 111 ntBASIC3.26□□□□□ -1.89
CD40P25942 RNU6-137P-201ENST00000363680 108 ntBASIC3.26□□□□□ -1.89
CD40P25942 RNU6-1210P-201ENST00000363775 107 ntBASIC3.26□□□□□ -1.89
CD40P25942 SNORD115-8-201ENST00000363856 82 ntBASIC3.26□□□□□ -1.89
CD40P25942 Y_RNA.183-201ENST00000363882 113 ntBASIC3.26□□□□□ -1.89
CD40P25942 RNA5SP139-201ENST00000364340 117 ntBASIC3.26□□□□□ -1.89
CD40P25942 SNORA73.2-201ENST00000364946 201 ntBASIC3.26□□□□□ -1.89
CD40P25942 SNORD115-38-201ENST00000365037 82 ntBASIC3.26□□□□□ -1.89
CD40P25942 SNORA5A-201ENST00000384111 134 ntBASIC3.26□□□□□ -1.89
CD40P25942 Y_RNA.439-201ENST00000384119 94 ntBASIC3.26□□□□□ -1.89
CD40P25942 Y_RNA.461-201ENST00000384263 103 ntBASIC3.26□□□□□ -1.89
CD40P25942 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
CD40P25942 RNU6-1093P-201ENST00000391194 107 ntBASIC3.26□□□□□ -1.89
CD40P25942 U3.26-201ENST00000391236 204 ntBASIC3.26□□□□□ -1.89
CD40P25942 RNU6-1001P-201ENST00000411265 100 ntBASIC3.26□□□□□ -1.89
CD40P25942 AL035423.1-201ENST00000420331 213 ntBASIC3.26□□□□□ -1.89
CD40P25942 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.26□□□□□ -1.89
CD40P25942 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.26□□□□□ -1.89
CD40P25942 AC006445.1-201ENST00000491925 405 ntBASIC3.26□□□□□ -1.89
CD40P25942 RPL7P47-201ENST00000497299 556 ntBASIC3.26□□□□□ -1.89
CD40P25942 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.26□□□□□ -1.89
CD40P25942 RNU6-1143P-201ENST00000516125 104 ntBASIC3.26□□□□□ -1.89
CD40P25942 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.26□□□□□ -1.89
CD40P25942 AC090877.1-201ENST00000561418 344 ntBASIC3.26□□□□□ -1.89
CD40P25942 MIR3923-201ENST00000579521 83 ntBASIC3.26□□□□□ -1.89
CD40P25942 MIR4659A-201ENST00000580269 81 ntBASIC3.26□□□□□ -1.89
CD40P25942 AL162713.1-201ENST00000604480 262 ntBASIC3.26□□□□□ -1.89
CD40P25942 SNORA62.6-201ENST00000606322 83 ntBASIC3.26□□□□□ -1.89
CD40P25942 SNORA51-201ENST00000606420 132 ntBASIC3.26□□□□□ -1.89
CD40P25942 AC107871.2-201ENST00000612894 502 ntBASIC3.26□□□□□ -1.89
CD40P25942 AC240442.1-201ENST00000616055 283 ntBASIC3.26□□□□□ -1.89
CD40P25942 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
CD40P25942 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD40P25942 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD40P25942 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD40P25942 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD40P25942 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.26□□□□□ -1.89
CD40P25942 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD40P25942 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40P25942 AL359854.1-201ENST00000614203 1594 ntBASIC3.25□□□□□ -1.89
CD40P25942 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40P25942 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40P25942 RNU6-281P-201ENST00000384212 103 ntBASIC3.25□□□□□ -1.89
CD40P25942 RNA5SP171-201ENST00000391071 115 ntBASIC3.25□□□□□ -1.89
CD40P25942 CBX3P9-201ENST00000402326 552 ntBASIC3.25□□□□□ -1.89
CD40P25942 HLFP1-201ENST00000402375 499 ntBASIC3.25□□□□□ -1.89
CD40P25942 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.25□□□□□ -1.89
CD40P25942 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.25□□□□□ -1.89
CD40P25942 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.25□□□□□ -1.89
CD40P25942 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.25□□□□□ -1.89
CD40P25942 LINC01399-202ENST00000458450 244 ntBASIC3.25□□□□□ -1.89
CD40P25942 AL121594.1-201ENST00000475906 575 ntBASIC3.25□□□□□ -1.89
CD40P25942 RPS26P15-201ENST00000488067 348 ntBASIC3.25□□□□□ -1.89
CD40P25942 RAC1P2-201ENST00000511164 579 ntBASIC3.25□□□□□ -1.89
CD40P25942 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.25□□□□□ -1.89
CD40P25942 RNA5SP143-201ENST00000516936 115 ntBASIC3.25□□□□□ -1.89
CD40P25942 AC026403.1-201ENST00000518938 295 ntBASIC3.25□□□□□ -1.89
CD40P25942 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.25□□□□□ -1.89
CD40P25942 AC110588.1-201ENST00000559699 137 ntBASIC3.25□□□□□ -1.89
CD40P25942 AC023824.2-201ENST00000566185 400 ntBASIC3.25□□□□□ -1.89
CD40P25942 MIR4765-201ENST00000585007 77 ntBASIC3.25□□□□□ -1.89
CD40P25942 AC011471.1-201ENST00000585766 187 ntBASIC3.25□□□□□ -1.89
CD40P25942 AC008739.3-201ENST00000603262 127 ntBASIC3.25□□□□□ -1.89
CD40P25942 AL137849.1-201ENST00000604767 169 ntBASIC3.25□□□□□ -1.89
CD40P25942 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.25□□□□□ -1.89
CD40P25942 AL034408.1-202ENST00000636088 415 ntBASIC3.25□□□□□ -1.89
CD40P25942 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40P25942 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.25□□□□□ -1.89
CD40P25942 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.25□□□□□ -1.89
CD40P25942 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD40P25942 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CD40P25942 MAPK10-373ENST00000641983 6772 ntBASIC3.24□□□□□ -1.89
CD40P25942 ZNF204P-201ENST00000416749 2397 ntBASIC3.24□□□□□ -1.89
CD40P25942 AL079305.1-201ENST00000623159 3008 ntBASIC3.24□□□□□ -1.89
CD40P25942 RNU6-873P-201ENST00000363833 107 ntBASIC3.24□□□□□ -1.89
CD40P25942 RNU6-1027P-201ENST00000383998 107 ntBASIC3.24□□□□□ -1.89
CD40P25942 RNU6-472P-201ENST00000384299 107 ntBASIC3.24□□□□□ -1.89
CD40P25942 RNU6-378P-201ENST00000384324 107 ntBASIC3.24□□□□□ -1.89
CD40P25942 AL079342.1-201ENST00000401460 267 ntBASIC3.24□□□□□ -1.89
CD40P25942 SNORD12B-201ENST00000410433 91 ntBASIC3.24□□□□□ -1.89
CD40P25942 RNU6-121P-201ENST00000410525 99 ntBASIC3.24□□□□□ -1.89
CD40P25942 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.24□□□□□ -1.89
CD40P25942 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
CD40P25942 AC097463.2-201ENST00000421074 142 ntBASIC3.24□□□□□ -1.89
CD40P25942 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.24□□□□□ -1.89
CD40P25942 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.24□□□□□ -1.89
CD40P25942 RPL23AP70-201ENST00000483361 460 ntBASIC3.24□□□□□ -1.89
CD40P25942 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms