Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MTND5P27-201ENST00000428871 1720 ntBASIC3.42□□□□□ -1.86
XPAP23025 AC233981.2-201ENST00000611524 1614 ntBASIC3.42□□□□□ -1.86
XPAP23025 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.42□□□□□ -1.86
XPAP23025 RNU1-105P-201ENST00000363470 161 ntBASIC3.42□□□□□ -1.86
XPAP23025 RNVU1-14-201ENST00000384770 164 ntBASIC3.42□□□□□ -1.86
XPAP23025 SNORA69.1-201ENST00000390904 137 ntBASIC3.42□□□□□ -1.86
XPAP23025 Y_RNA.592-201ENST00000410274 109 ntBASIC3.42□□□□□ -1.86
XPAP23025 AL358453.1-201ENST00000422522 250 ntBASIC3.42□□□□□ -1.86
XPAP23025 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.42□□□□□ -1.86
XPAP23025 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.42□□□□□ -1.86
XPAP23025 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.42□□□□□ -1.86
XPAP23025 AL513124.1-201ENST00000450410 614 ntBASIC3.42□□□□□ -1.86
XPAP23025 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.42□□□□□ -1.86
XPAP23025 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.42□□□□□ -1.86
XPAP23025 U8.22-201ENST00000459141 133 ntBASIC3.42□□□□□ -1.86
XPAP23025 RN7SKP210-201ENST00000459176 261 ntBASIC3.42□□□□□ -1.86
XPAP23025 TOMM22P6-201ENST00000465035 409 ntBASIC3.42□□□□□ -1.86
XPAP23025 RN7SL601P-201ENST00000471221 293 ntBASIC3.42□□□□□ -1.86
XPAP23025 RPL23AP75-201ENST00000491601 451 ntBASIC3.42□□□□□ -1.86
XPAP23025 Y_RNA.715-201ENST00000517082 110 ntBASIC3.42□□□□□ -1.86
XPAP23025 AC107934.2-201ENST00000518653 310 ntBASIC3.42□□□□□ -1.86
XPAP23025 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.42□□□□□ -1.86
XPAP23025 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.42□□□□□ -1.86
XPAP23025 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
XPAP23025 RPL23AP78-201ENST00000599928 470 ntBASIC3.42□□□□□ -1.86
XPAP23025 AC016727.2-201ENST00000603988 621 ntBASIC3.42□□□□□ -1.86
XPAP23025 Z98751.3-201ENST00000604447 521 ntBASIC3.42□□□□□ -1.86
XPAP23025 AL162713.1-201ENST00000604480 262 ntBASIC3.42□□□□□ -1.86
XPAP23025 AC019159.1-201ENST00000605094 187 ntBASIC3.42□□□□□ -1.86
XPAP23025 AC022149.2-201ENST00000621061 203 ntBASIC3.42□□□□□ -1.86
XPAP23025 SNORA43.4-201ENST00000629559 138 ntBASIC3.42□□□□□ -1.86
XPAP23025 MIR3199-2-201ENST00000636243 86 ntBASIC3.42□□□□□ -1.86
XPAP23025 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
XPAP23025 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
XPAP23025 AL513302.2-201ENST00000562313 1842 ntBASIC3.42□□□□□ -1.86
XPAP23025 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.41□□□□□ -1.86
XPAP23025 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
XPAP23025 AP000560.1-201ENST00000624150 1937 ntBASIC3.41□□□□□ -1.86
XPAP23025 Z83843.1-201ENST00000604070 3685 ntBASIC3.41□□□□□ -1.86
XPAP23025 Y_RNA.176-201ENST00000363815 109 ntBASIC3.41□□□□□ -1.86
XPAP23025 Y_RNA.210-201ENST00000364161 110 ntBASIC3.41□□□□□ -1.86
XPAP23025 Y_RNA.358-201ENST00000365491 99 ntBASIC3.41□□□□□ -1.86
XPAP23025 Y_RNA.452-201ENST00000384202 108 ntBASIC3.41□□□□□ -1.86
XPAP23025 RNU6-1109P-201ENST00000391187 107 ntBASIC3.41□□□□□ -1.86
XPAP23025 MIR190B-201ENST00000401119 79 ntBASIC3.41□□□□□ -1.86
XPAP23025 MIR1252-201ENST00000408861 65 ntBASIC3.41□□□□□ -1.86
XPAP23025 RN7SKP111-201ENST00000410349 271 ntBASIC3.41□□□□□ -1.86
XPAP23025 RNU2-49P-201ENST00000410666 184 ntBASIC3.41□□□□□ -1.86
XPAP23025 AC126124.2-201ENST00000413542 321 ntBASIC3.41□□□□□ -1.86
XPAP23025 RPS15AP5-201ENST00000436276 388 ntBASIC3.41□□□□□ -1.86
XPAP23025 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.41□□□□□ -1.86
XPAP23025 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.41□□□□□ -1.86
XPAP23025 MTCO3P8-201ENST00000453691 755 ntBASIC3.41□□□□□ -1.86
XPAP23025 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.41□□□□□ -1.86
XPAP23025 RNU7-23P-201ENST00000459465 62 ntBASIC3.41□□□□□ -1.86
XPAP23025 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
XPAP23025 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
XPAP23025 AC097462.2-201ENST00000504623 481 ntBASIC3.41□□□□□ -1.86
XPAP23025 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.41□□□□□ -1.86
XPAP23025 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.41□□□□□ -1.86
XPAP23025 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.41□□□□□ -1.86
XPAP23025 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
XPAP23025 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.41□□□□□ -1.86
XPAP23025 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.41□□□□□ -1.86
XPAP23025 AL021879.1-201ENST00000611756 288 ntBASIC3.41□□□□□ -1.86
XPAP23025 AC010205.1-201ENST00000616668 449 ntBASIC3.41□□□□□ -1.86
XPAP23025 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.41□□□□□ -1.86
XPAP23025 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
XPAP23025 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
XPAP23025 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
XPAP23025 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.41□□□□□ -1.86
XPAP23025 AL049781.1-201ENST00000623195 3585 ntBASIC3.41□□□□□ -1.86
XPAP23025 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
XPAP23025 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
XPAP23025 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.4□□□□□ -1.86
XPAP23025 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
XPAP23025 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
XPAP23025 RNA5SP267-201ENST00000364893 126 ntBASIC3.4□□□□□ -1.87
XPAP23025 RNU6-968P-201ENST00000384076 107 ntBASIC3.4□□□□□ -1.87
XPAP23025 RNU6-1140P-201ENST00000410517 106 ntBASIC3.4□□□□□ -1.87
XPAP23025 RNU6-1245P-201ENST00000411130 106 ntBASIC3.4□□□□□ -1.87
XPAP23025 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.4□□□□□ -1.87
XPAP23025 AP000907.1-201ENST00000428428 510 ntBASIC3.4□□□□□ -1.87
XPAP23025 AL161651.1-201ENST00000440882 223 ntBASIC3.4□□□□□ -1.87
XPAP23025 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.4□□□□□ -1.87
XPAP23025 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.4□□□□□ -1.87
XPAP23025 AC091153.1-201ENST00000466297 402 ntBASIC3.4□□□□□ -1.87
XPAP23025 AF186996.7-201ENST00000492781 209 ntBASIC3.4□□□□□ -1.87
XPAP23025 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.4□□□□□ -1.87
XPAP23025 AC104581.2-201ENST00000572227 430 ntBASIC3.4□□□□□ -1.87
XPAP23025 AL355297.3-201ENST00000604082 446 ntBASIC3.4□□□□□ -1.87
XPAP23025 AC007179.3-201ENST00000604976 235 ntBASIC3.4□□□□□ -1.87
XPAP23025 PRR13P7-201ENST00000605538 430 ntBASIC3.4□□□□□ -1.87
XPAP23025 RNVU1-4-201ENST00000612985 164 ntBASIC3.4□□□□□ -1.87
XPAP23025 AL138825.1-201ENST00000618587 192 ntBASIC3.4□□□□□ -1.87
XPAP23025 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
XPAP23025 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
XPAP23025 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
XPAP23025 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
XPAP23025 RNA5SP387-201ENST00000364226 106 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms