Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN1P18031 AC010928.2-201ENST00000588017 287 ntBASIC3.6□□□□□ -1.83
PTPN1P18031 AL161756.2-201ENST00000604597 246 ntBASIC3.6□□□□□ -1.83
PTPN1P18031 AC019159.1-201ENST00000605094 187 ntBASIC3.6□□□□□ -1.83
PTPN1P18031 RPL23AP88-201ENST00000605759 454 ntBASIC3.6□□□□□ -1.83
PTPN1P18031 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.6□□□□□ -1.83
PTPN1P18031 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN1P18031 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN1P18031 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
PTPN1P18031 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN1P18031 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN1P18031 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN1P18031 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN1P18031 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN1P18031 RNU1-140P-201ENST00000365040 165 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 RNU6-130P-201ENST00000411112 103 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN1P18031 AC007969.2-201ENST00000441891 191 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN1P18031 LINC01399-202ENST00000458450 244 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 RNU6-1132P-201ENST00000459214 107 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 RPS26P21-201ENST00000475397 348 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 RPL30P1-201ENST00000488676 339 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AC010469.2-201ENST00000496412 480 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AC091874.1-201ENST00000511402 339 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AC067942.3-201ENST00000512025 362 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.59□□□□□ -1.83
PTPN1P18031 RNU6-581P-201ENST00000516214 105 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 RN7SKP272-201ENST00000516988 232 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 RNU6-388P-201ENST00000517012 105 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 RNU6-389P-201ENST00000517048 105 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 NDUFB9P3-201ENST00000521269 501 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AP003733.2-201ENST00000529409 171 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN1P18031 SYF2P1-201ENST00000550658 413 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN1P18031 AC005357.1-201ENST00000588399 301 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN1P18031 AL356157.2-201ENST00000605122 111 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 AC096577.2-201ENST00000611455 153 ntBASIC3.59□□□□□ -1.83
PTPN1P18031 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN1P18031 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN1P18031 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN1P18031 AC010615.1-201ENST00000594254 1764 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN1P18031 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.58□□□□□ -1.84
PTPN1P18031 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN1P18031 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
PTPN1P18031 ADAM3A-203ENST00000461344 2157 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN1P18031 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN1P18031 SNORD32A-201ENST00000364805 84 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 Y_RNA.458-201ENST00000384240 102 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 RNY3P4-201ENST00000384428 101 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PTPN1P18031 PTMAP5-201ENST00000393073 333 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN1P18031 SDAD1P3-201ENST00000427380 333 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.58□□□□□ -1.84
PTPN1P18031 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN1P18031 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN1P18031 SNORD127-201ENST00000458892 86 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 U8.22-201ENST00000459141 133 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 MED28P2-201ENST00000475771 317 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 AP002770.2-201ENST00000543613 532 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 AC021739.1-201ENST00000559631 174 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN1P18031 AC090617.3-201ENST00000573670 475 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 HSPE1P7-201ENST00000604681 321 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 RMST_6.1-201ENST00000611980 203 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 AC091903.1-201ENST00000624322 454 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN1P18031 U6.92-201ENST00000636464 89 ntBASIC3.58□□□□□ -1.84
PTPN1P18031 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN1P18031 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN1P18031 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN1P18031 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
PTPN1P18031 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN1P18031 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN1P18031 Y_RNA.105-201ENST00000363182 111 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 SNORD115-32-201ENST00000364079 82 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 Y_RNA.350-201ENST00000365409 98 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 RNU6-17P-201ENST00000384245 107 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 RNU6-18P-201ENST00000384527 107 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 MIR23A-201ENST00000385245 73 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PTPN1P18031 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTPN1P18031 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.57□□□□□ -1.84
PTPN1P18031 RPL23AP95-201ENST00000426806 265 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 AC005300.1-201ENST00000428401 373 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 AL590664.1-201ENST00000448065 339 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.57□□□□□ -1.84
PTPN1P18031 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.57□□□□□ -1.84
PTPN1P18031 RPL32P34-201ENST00000486380 400 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 AF186996.7-201ENST00000492781 209 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.57□□□□□ -1.84
PTPN1P18031 AC025465.3-201ENST00000510570 311 ntBASIC3.57□□□□□ -1.84
PTPN1P18031 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.57□□□□□ -1.84
PTPN1P18031 SNORA31.23-201ENST00000517219 133 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms