Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.59□□□□□ -1.83
COL6A2P12110 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
COL6A2P12110 RPL39P38-201ENST00000467018 153 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 RN7SL132P-201ENST00000478131 296 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.59□□□□□ -1.83
COL6A2P12110 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.59□□□□□ -1.83
COL6A2P12110 AC007375.1-201ENST00000554513 578 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 MIR3128-201ENST00000581957 66 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 Y_RNA.772-201ENST00000606692 102 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.59□□□□□ -1.83
COL6A2P12110 AC141273.2-201ENST00000618989 130 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 LINC02555-201ENST00000563933 1951 ntBASIC3.59□□□□□ -1.83
COL6A2P12110 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
COL6A2P12110 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
COL6A2P12110 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
COL6A2P12110 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL6A2P12110 RNU6-622P-201ENST00000384272 103 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 MIR554-201ENST00000384874 96 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 MIR32-201ENST00000384965 70 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 RN7SKP202-201ENST00000410439 330 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 RNU2-25P-201ENST00000411041 191 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 RPL21P38-201ENST00000418090 167 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 AC091286.1-201ENST00000431233 461 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.58□□□□□ -1.84
COL6A2P12110 AC098869.1-201ENST00000481627 292 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 AC016632.1-201ENST00000503994 196 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 PHBP14-201ENST00000512887 367 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 RNU6-570P-201ENST00000517051 105 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 ACA59.2-201ENST00000517061 156 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 AC093023.1-201ENST00000547375 507 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.58□□□□□ -1.84
COL6A2P12110 MIR4286-201ENST00000580651 93 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 AC024220.1-201ENST00000603675 484 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 AC240442.1-201ENST00000616055 283 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 AC002076.2-201ENST00000617362 122 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.58□□□□□ -1.84
COL6A2P12110 SNORA50A-202ENST00000629536 136 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 MIR3199-2-201ENST00000636243 86 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL6A2P12110 MTND5P6-201ENST00000422338 1798 ntBASIC3.58□□□□□ -1.84
COL6A2P12110 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.57□□□□□ -1.84
COL6A2P12110 MIR335-201ENST00000362173 94 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 Y_RNA.84-201ENST00000363011 104 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.57□□□□□ -1.84
COL6A2P12110 U8.10-201ENST00000384260 133 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 SNORD78.2-201ENST00000391076 69 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 RNU1-101P-201ENST00000391171 127 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AC096920.1-201ENST00000423991 241 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AC005300.1-201ENST00000428401 373 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.57□□□□□ -1.84
COL6A2P12110 snoU13.28-201ENST00000459235 104 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 snoU13.22-201ENST00000459428 104 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AL133162.1-201ENST00000463228 453 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 RPS4XP22-201ENST00000480755 780 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 RPL30P14-201ENST00000482744 348 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 RPS23P5-201ENST00000495419 428 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AC107222.1-201ENST00000510899 637 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.57□□□□□ -1.84
COL6A2P12110 RNU6-1114P-201ENST00000516022 107 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 RN7SKP272-201ENST00000516988 232 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AC022868.1-201ENST00000517767 391 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 HSPE1P4-201ENST00000550617 308 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.57□□□□□ -1.84
COL6A2P12110 AC136932.1-201ENST00000574771 208 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 HMGN2P15-201ENST00000585707 270 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AC099778.2-201ENST00000610904 211 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 SDR42E1P4-201ENST00000620894 481 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AC078938.1-201ENST00000620993 318 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AL354798.1-201ENST00000622505 329 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 AL450472.1-202ENST00000637286 180 ntBASIC3.57□□□□□ -1.84
COL6A2P12110 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
COL6A2P12110 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL6A2P12110 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.57□□□□□ -1.84
COL6A2P12110 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL6A2P12110 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.56□□□□□ -1.84
COL6A2P12110 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.56□□□□□ -1.84
COL6A2P12110 AC010680.1-201ENST00000590024 3590 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL6A2P12110 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.56□□□□□ -1.84
COL6A2P12110 AC092268.1-201ENST00000342691 405 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 RNU6-222P-201ENST00000362438 107 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 RNU6-1285P-201ENST00000363480 105 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 SNORD115-8-201ENST00000363856 82 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 SNORD115-38-201ENST00000365037 82 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 RNU1-140P-201ENST00000365040 165 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 RNA5SP171-201ENST00000391071 115 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 SNORA26.3-201ENST00000391119 136 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 MRPL35P1-201ENST00000404272 572 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.56□□□□□ -1.84
COL6A2P12110 RPS29P7-201ENST00000439662 171 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.56□□□□□ -1.84
COL6A2P12110 RNU5F-8P-201ENST00000515941 111 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 SNORA31.6-201ENST00000516241 130 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 RNU6-1198P-201ENST00000516904 67 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 SNORD19.2-201ENST00000516978 73 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 AC026333.2-201ENST00000542164 106 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 MIR4300-201ENST00000581016 96 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 AC090897.2-201ENST00000581715 130 ntBASIC3.56□□□□□ -1.84
COL6A2P12110 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms