Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 VN1R80P-201ENST00000597126 338 ntBASIC2.03□□□□□ -2.08
SFTPBP07988 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SFTPBP07988 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.03□□□□□ -2.08
SFTPBP07988 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SFTPBP07988 ZNF720P1-201ENST00000562403 1939 ntBASIC2.03□□□□□ -2.08
SFTPBP07988 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SFTPBP07988 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SFTPBP07988 RNA5SP289-201ENST00000362332 137 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 RNA5SP432-201ENST00000362480 116 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 RNU6-1285P-201ENST00000363480 105 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 SNORD114-30-201ENST00000364448 72 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 RNU4-75P-201ENST00000364621 146 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 SNORA67.4-201ENST00000384688 142 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 MIR504-201ENST00000385065 83 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 SNORD73A-201ENST00000386062 65 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 CALM2P3-201ENST00000400429 449 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 Y_RNA.597-201ENST00000410463 100 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 HMGB3P2-201ENST00000411913 584 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.02□□□□□ -2.09
SFTPBP07988 MORF4L1P6-201ENST00000418771 268 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 AC016907.1-201ENST00000419483 435 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SFTPBP07988 DNAJC19P4-201ENST00000440115 345 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SFTPBP07988 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.02□□□□□ -2.09
SFTPBP07988 TPTE2P5-203ENST00000458118 728 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.02□□□□□ -2.09
SFTPBP07988 snoU13.26-201ENST00000459452 105 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 SRRM1P2-201ENST00000464531 1192 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 MTCO3P38-201ENST00000468910 766 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 AC107032.1-201ENST00000485945 480 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 AC107401.1-201ENST00000503426 685 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 MTND3P5-201ENST00000512798 333 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 COPS8P3-201ENST00000526024 482 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 NDUFA5P6-201ENST00000542110 379 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 AC024909.2-201ENST00000553035 286 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 OR11H5P-201ENST00000554039 926 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 AL118558.2-201ENST00000556294 238 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 MIR3941-201ENST00000582572 103 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 AC124864.2-201ENST00000624736 186 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 MIR1291-201ENST00000627649 87 ntBASIC2.02□□□□□ -2.09
SFTPBP07988 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SFTPBP07988 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 RNU6-743P-201ENST00000364151 106 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 RNU6-1322P-201ENST00000364309 107 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 RNU4-66P-201ENST00000365199 138 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 RNU4-20P-201ENST00000365601 151 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 MTCO3P40-201ENST00000392516 676 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 RPS29P13-201ENST00000402041 169 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.01□□□□□ -2.09
SFTPBP07988 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.01□□□□□ -2.09
SFTPBP07988 USP9YP18-201ENST00000425912 695 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.01□□□□□ -2.09
SFTPBP07988 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.01□□□□□ -2.09
SFTPBP07988 AC010095.1-201ENST00000443543 144 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.01□□□□□ -2.09
SFTPBP07988 AC026436.1-201ENST00000510537 270 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.01□□□□□ -2.09
SFTPBP07988 RNA5SP137-201ENST00000516833 135 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.01□□□□□ -2.09
SFTPBP07988 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.01□□□□□ -2.09
SFTPBP07988 AC080013.6-201ENST00000606185 215 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 YWHAEP7-203ENST00000622054 312 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 MIR7843-201ENST00000622274 79 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.01□□□□□ -2.09
SFTPBP07988 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
SFTPBP07988 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
SFTPBP07988 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SFTPBP07988 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2□□□□□ -2.09
SFTPBP07988 SNORD115-3-201ENST00000363100 82 ntBASIC2□□□□□ -2.09
SFTPBP07988 RNU6-1085P-201ENST00000363576 107 ntBASIC2□□□□□ -2.09
SFTPBP07988 Y_RNA.194-201ENST00000363985 102 ntBASIC2□□□□□ -2.09
SFTPBP07988 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SFTPBP07988 RNU6-780P-201ENST00000391030 104 ntBASIC2□□□□□ -2.09
SFTPBP07988 HMGN2P39-201ENST00000398005 273 ntBASIC2□□□□□ -2.09
SFTPBP07988 RNA5SP425-201ENST00000410336 112 ntBASIC2□□□□□ -2.09
SFTPBP07988 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2□□□□□ -2.09
SFTPBP07988 DLGAP5P1-201ENST00000430307 464 ntBASIC2□□□□□ -2.09
SFTPBP07988 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2□□□□□ -2.09
SFTPBP07988 AL137159.1-201ENST00000452808 512 ntBASIC2□□□□□ -2.09
SFTPBP07988 RNU6-261P-201ENST00000459506 102 ntBASIC2□□□□□ -2.09
SFTPBP07988 RN7SL636P-201ENST00000497504 294 ntBASIC2□□□□□ -2.09
SFTPBP07988 HMGB1P35-201ENST00000503360 598 ntBASIC2□□□□□ -2.09
SFTPBP07988 AC234781.5-201ENST00000508429 271 ntBASIC2□□□□□ -2.09
SFTPBP07988 AC009646.1-201ENST00000510455 318 ntBASIC2□□□□□ -2.09
SFTPBP07988 SNORA14.1-201ENST00000516113 141 ntBASIC2□□□□□ -2.09
SFTPBP07988 RNU6-189P-201ENST00000516120 101 ntBASIC2□□□□□ -2.09
SFTPBP07988 RNU6-835P-201ENST00000516974 104 ntBASIC2□□□□□ -2.09
SFTPBP07988 AC115990.1-201ENST00000526957 301 ntBASIC2□□□□□ -2.09
SFTPBP07988 AC022616.8-201ENST00000533569 253 ntBASIC2□□□□□ -2.09
SFTPBP07988 AL512310.1-201ENST00000548639 172 ntBASIC2□□□□□ -2.09
SFTPBP07988 AC078814.3-201ENST00000553036 491 ntBASIC2□□□□□ -2.09
SFTPBP07988 AC026271.5-201ENST00000577873 130 ntBASIC2□□□□□ -2.09
SFTPBP07988 AC092747.3-201ENST00000603769 301 ntBASIC2□□□□□ -2.09
SFTPBP07988 AL359880.1-201ENST00000621879 266 ntBASIC2□□□□□ -2.09
SFTPBP07988 SNORD98-201ENST00000636377 67 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms