Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.36□□□□□ -2.19
MT-ND4P03905 RNU6-991P-201ENST00000516168 107 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.36□□□□□ -2.19
MT-ND4P03905 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.36□□□□□ -2.19
MT-ND4P03905 AK6P1-201ENST00000540219 478 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.36□□□□□ -2.19
MT-ND4P03905 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.36□□□□□ -2.19
MT-ND4P03905 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.36□□□□□ -2.19
MT-ND4P03905 AC012414.6-201ENST00000568241 401 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 AC016925.2-201ENST00000605108 242 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 Z84480.1-201ENST00000605131 311 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 AC087683.2-201ENST00000611384 326 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 MIR8081-201ENST00000611533 95 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 uc_338.5-201ENST00000611839 155 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
MT-ND4P03905 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.36□□□□□ -2.19
MT-ND4P03905 AC023510.2-201ENST00000622162 746 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.36□□□□□ -2.19
MT-ND4P03905 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
MT-ND4P03905 RNU1-58P-201ENST00000362413 163 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 RNU6-1285P-201ENST00000363480 105 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 RNU6-282P-201ENST00000365357 103 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
MT-ND4P03905 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
MT-ND4P03905 RNU6-248P-201ENST00000410720 107 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 CBX3P6-201ENST00000430257 527 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 AL596276.1-201ENST00000434465 418 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.35□□□□□ -2.19
MT-ND4P03905 AC243964.1-201ENST00000441814 261 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 SNRPGP9-201ENST00000456025 225 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.35□□□□□ -2.19
MT-ND4P03905 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 SNORA18.6-201ENST00000516792 115 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 RNA5SP503-201ENST00000517047 117 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 MIR4255-201ENST00000579351 72 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.35□□□□□ -2.19
MT-ND4P03905 AL590229.1-201ENST00000603497 542 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 AC123912.5-201ENST00000605470 343 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 MIR502-201ENST00000606349 86 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 MIR6845-201ENST00000613182 61 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND4P03905 SEPT14P19-203ENST00000633205 211 ntBASIC1.35□□□□□ -2.19
MT-ND4P03905 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
MT-ND4P03905 FGF7P2-201ENST00000332473 296 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 RNU6-1097P-201ENST00000363586 107 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.34□□□□□ -2.19
MT-ND4P03905 BX295541.1-201ENST00000417774 250 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AL358453.1-201ENST00000422522 250 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 UBE2V1P4-201ENST00000425374 344 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.34□□□□□ -2.19
MT-ND4P03905 RNA5SP57-201ENST00000459463 123 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 MTCO2P6-201ENST00000463134 685 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.34□□□□□ -2.19
MT-ND4P03905 MTCO3P28-201ENST00000513351 515 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 RNU6-377P-201ENST00000515965 102 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AP001893.2-201ENST00000526949 202 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.34□□□□□ -2.19
MT-ND4P03905 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
MT-ND4P03905 AC018889.1-201ENST00000605372 397 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AC008945.2-201ENST00000606056 604 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AL022345.1-201ENST00000607292 135 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AC006566.1-201ENST00000608943 513 ntBASIC1.34□□□□□ -2.19
MT-ND4P03905 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.34□□□□□ -2.19
MT-ND4P03905 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
MT-ND4P03905 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
MT-ND4P03905 RNU4-15P-201ENST00000362613 141 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 RNU6-428P-201ENST00000362942 107 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 Y_RNA.99-201ENST00000363138 105 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.33□□□□□ -2.2
MT-ND4P03905 RNU6-338P-201ENST00000383888 105 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 RNU6-692P-201ENST00000384496 107 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 RNY3P10-201ENST00000384764 102 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 SNORA12-201ENST00000391162 147 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 RNU6-293P-201ENST00000411259 106 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
MT-ND4P03905 AL590556.1-201ENST00000423231 483 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.33□□□□□ -2.2
MT-ND4P03905 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.33□□□□□ -2.2
MT-ND4P03905 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.33□□□□□ -2.2
MT-ND4P03905 MTCO3P7-201ENST00000510008 774 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 FAM206BP-201ENST00000510179 541 ntBASIC1.33□□□□□ -2.2
MT-ND4P03905 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.33□□□□□ -2.2
MT-ND4P03905 MIR449C-201ENST00000516047 92 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms