Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AP001893.2-201ENST00000526949 202 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC022616.8-201ENST00000533569 253 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 HIF1AP1-201ENST00000553642 175 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 MTCO3P23-201ENST00000561363 289 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC026271.5-201ENST00000577873 130 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 MIR4529-201ENST00000578110 78 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 MIR3618-201ENST00000580330 88 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AL109918.3-201ENST00000603072 338 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC073648.5-201ENST00000603502 305 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 SNRPGP17-201ENST00000603780 214 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 RN7SKP299-201ENST00000606679 301 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC007684.1-201ENST00000609671 477 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AL359314.1-201ENST00000616913 261 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 MIR1248-201ENST00000629190 106 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 AC241585.2-209ENST00000638217 143 ntBASIC1.42□□□□□ -2.18
HLA-DQA1P01909 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
HLA-DQA1P01909 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 RNU6-266P-201ENST00000364225 107 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 RNU6-1103P-201ENST00000384150 107 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 RNU6-611P-201ENST00000384276 104 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 Y_RNA.480-201ENST00000384364 102 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 GSTA9P-201ENST00000406231 611 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 RN7SKP32-201ENST00000410167 303 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 RPL31P63-201ENST00000422565 375 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC073464.1-201ENST00000429823 534 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC002486.1-201ENST00000435098 391 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AL031274.1-201ENST00000450334 232 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 FDX1P2-201ENST00000450769 375 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC013470.1-201ENST00000453438 462 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 PMCHL2-203ENST00000457791 237 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC087884.1-201ENST00000469738 328 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 MTND2P33-201ENST00000506452 1031 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 RN7SKP298-201ENST00000515950 94 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 RN7SKP256-201ENST00000517201 314 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AL137161.1-201ENST00000532231 390 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC022880.1-201ENST00000534017 973 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC103996.1-201ENST00000555468 102 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC091805.2-201ENST00000603848 235 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AC107304.1-201ENST00000604229 296 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AL354950.2-201ENST00000617939 290 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 AL590808.1-201ENST00000618696 141 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 YWHAEP7-203ENST00000622054 312 ntBASIC1.41□□□□□ -2.18
HLA-DQA1P01909 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DQA1P01909 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HLA-DQA1P01909 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 MTND5P6-201ENST00000422338 1798 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 MTND4P14-201ENST00000435799 1354 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU4-15P-201ENST00000362613 141 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 U8.2-201ENST00000363156 134 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU6-996P-201ENST00000365438 107 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU6-827P-201ENST00000365553 106 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 Y_RNA.399-201ENST00000383955 105 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU5A-6P-201ENST00000384136 116 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU6-43P-201ENST00000384302 107 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU6-517P-201ENST00000384362 110 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 MIR29B2-201ENST00000385055 81 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU6-1245P-201ENST00000411130 106 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 Z98742.3-201ENST00000418637 326 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AC096638.1-201ENST00000444678 216 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AC073415.1-201ENST00000449240 153 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RPL23AP3-201ENST00000453844 468 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU7-63P-201ENST00000459054 62 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RNU7-180P-201ENST00000459240 63 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 RPS3AP17-201ENST00000472594 777 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 CCDC34P1-201ENST00000507441 517 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AC010493.1-201ENST00000513479 292 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AC109479.2-201ENST00000517842 174 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AL512310.1-201ENST00000548639 172 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 SNRPGP18-201ENST00000553000 214 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AC007375.1-201ENST00000554513 578 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AC026464.5-201ENST00000562497 722 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 MIR5089-201ENST00000580047 84 ntBASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQA1P01909 AP001596.2-201ENST00000608410 312 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms