Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.59□□□□□ -1.99
ZIC3O60481 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
ZIC3O60481 RNU1-35P-201ENST00000362782 153 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 Y_RNA.187-201ENST00000363918 113 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 AL133475.1-201ENST00000404414 305 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 USMG5P1-201ENST00000425964 177 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 AL358075.3-201ENST00000426289 226 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.59□□□□□ -1.99
ZIC3O60481 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.59□□□□□ -1.99
ZIC3O60481 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.59□□□□□ -1.99
ZIC3O60481 AC012308.1-201ENST00000451232 178 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.59□□□□□ -1.99
ZIC3O60481 AP001486.1-201ENST00000463339 476 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.59□□□□□ -1.99
ZIC3O60481 RN7SL283P-201ENST00000489055 303 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 SNORA31.6-201ENST00000516241 130 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 Y_RNA.701-201ENST00000516812 110 ntBASIC2.59□□□□□ -1.99
ZIC3O60481 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ZIC3O60481 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.59□□□□□ -1.99
ZIC3O60481 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.59□□□□□ -1.99
ZIC3O60481 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.59□□□□□ -1.99
ZIC3O60481 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
ZIC3O60481 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.58□□□□□ -2
ZIC3O60481 Y_RNA.2-201ENST00000362330 96 ntBASIC2.58□□□□□ -2
ZIC3O60481 SNORD50.1-201ENST00000362987 71 ntBASIC2.58□□□□□ -2
ZIC3O60481 RNU6-784P-201ENST00000384330 106 ntBASIC2.58□□□□□ -2
ZIC3O60481 RNU6-331P-201ENST00000384724 107 ntBASIC2.58□□□□□ -2
ZIC3O60481 MIR544A-201ENST00000384855 91 ntBASIC2.58□□□□□ -2
ZIC3O60481 AL512633.1-201ENST00000399931 655 ntBASIC2.58□□□□□ -2
ZIC3O60481 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.58□□□□□ -2
ZIC3O60481 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.58□□□□□ -2
ZIC3O60481 RPL23AP95-201ENST00000426806 265 ntBASIC2.58□□□□□ -2
ZIC3O60481 AL441985.1-201ENST00000457727 251 ntBASIC2.58□□□□□ -2
ZIC3O60481 AP001324.2-201ENST00000461163 319 ntBASIC2.58□□□□□ -2
ZIC3O60481 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.58□□□□□ -2
ZIC3O60481 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.58□□□□□ -2
ZIC3O60481 MRPS36P2-201ENST00000512569 299 ntBASIC2.58□□□□□ -2
ZIC3O60481 AC093303.1-201ENST00000514549 295 ntBASIC2.58□□□□□ -2
ZIC3O60481 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.58□□□□□ -2
ZIC3O60481 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
ZIC3O60481 AC093249.1-201ENST00000567049 203 ntBASIC2.58□□□□□ -2
ZIC3O60481 RPS15AP11-201ENST00000594193 385 ntBASIC2.58□□□□□ -2
ZIC3O60481 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.58□□□□□ -2
ZIC3O60481 AL356055.1-201ENST00000602528 446 ntBASIC2.58□□□□□ -2
ZIC3O60481 AL356157.2-201ENST00000605122 111 ntBASIC2.58□□□□□ -2
ZIC3O60481 uc_338.14-201ENST00000613162 166 ntBASIC2.58□□□□□ -2
ZIC3O60481 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.58□□□□□ -2
ZIC3O60481 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.58□□□□□ -2
ZIC3O60481 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.58□□□□□ -2
ZIC3O60481 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
ZIC3O60481 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZIC3O60481 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZIC3O60481 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
ZIC3O60481 MTND5P19-201ENST00000424872 1794 ntBASIC2.57□□□□□ -2
ZIC3O60481 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.57□□□□□ -2
ZIC3O60481 AC008264.2-201ENST00000610193 3731 ntBASIC2.57□□□□□ -2
ZIC3O60481 Y_RNA.146-201ENST00000363549 102 ntBASIC2.57□□□□□ -2
ZIC3O60481 SNORD42.2-201ENST00000365570 69 ntBASIC2.57□□□□□ -2
ZIC3O60481 RNU6-890P-201ENST00000384121 107 ntBASIC2.57□□□□□ -2
ZIC3O60481 RNU6-1222P-201ENST00000384615 107 ntBASIC2.57□□□□□ -2
ZIC3O60481 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.57□□□□□ -2
ZIC3O60481 SNORA75.6-201ENST00000391318 127 ntBASIC2.57□□□□□ -2
ZIC3O60481 BTF3L4P2-201ENST00000392798 346 ntBASIC2.57□□□□□ -2
ZIC3O60481 RNU6-1140P-201ENST00000410517 106 ntBASIC2.57□□□□□ -2
ZIC3O60481 RN7SKP58-201ENST00000411010 305 ntBASIC2.57□□□□□ -2
ZIC3O60481 NUP35P1-201ENST00000422734 947 ntBASIC2.57□□□□□ -2
ZIC3O60481 EIF4EP2-201ENST00000422816 654 ntBASIC2.57□□□□□ -2
ZIC3O60481 BX276092.3-201ENST00000424182 230 ntBASIC2.57□□□□□ -2
ZIC3O60481 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.57□□□□□ -2
ZIC3O60481 AC079354.2-201ENST00000453523 154 ntBASIC2.57□□□□□ -2
ZIC3O60481 RPL31P41-201ENST00000477967 372 ntBASIC2.57□□□□□ -2
ZIC3O60481 FO393415.2-201ENST00000480085 343 ntBASIC2.57□□□□□ -2
ZIC3O60481 AC027575.1-201ENST00000481064 460 ntBASIC2.57□□□□□ -2
ZIC3O60481 AC096576.1-201ENST00000489014 359 ntBASIC2.57□□□□□ -2
ZIC3O60481 AC091874.1-201ENST00000511402 339 ntBASIC2.57□□□□□ -2
ZIC3O60481 SCARNA17.1-201ENST00000516211 143 ntBASIC2.57□□□□□ -2
ZIC3O60481 SCARNA17.2-201ENST00000516334 143 ntBASIC2.57□□□□□ -2
ZIC3O60481 SCARNA16.2-201ENST00000516520 172 ntBASIC2.57□□□□□ -2
ZIC3O60481 SNORA31.26-201ENST00000517250 137 ntBASIC2.57□□□□□ -2
ZIC3O60481 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.57□□□□□ -2
ZIC3O60481 MIR5696-201ENST00000578474 85 ntBASIC2.57□□□□□ -2
ZIC3O60481 MIR4273-201ENST00000582824 84 ntBASIC2.57□□□□□ -2
ZIC3O60481 AC008739.2-201ENST00000597006 317 ntBASIC2.57□□□□□ -2
ZIC3O60481 AL137843.1-201ENST00000605078 385 ntBASIC2.57□□□□□ -2
ZIC3O60481 AC080078.3-201ENST00000605407 463 ntBASIC2.57□□□□□ -2
ZIC3O60481 AC090115.4-201ENST00000609970 188 ntBASIC2.57□□□□□ -2
ZIC3O60481 SCARNA17.4-201ENST00000614296 143 ntBASIC2.57□□□□□ -2
ZIC3O60481 AC133104.2-201ENST00000615272 193 ntBASIC2.57□□□□□ -2
ZIC3O60481 AC092608.2-201ENST00000624427 218 ntBASIC2.57□□□□□ -2
ZIC3O60481 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZIC3O60481 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
ZIC3O60481 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZIC3O60481 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.56□□□□□ -2
ZIC3O60481 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
ZIC3O60481 AL109809.4-201ENST00000603520 2185 ntBASIC2.56□□□□□ -2
ZIC3O60481 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZIC3O60481 Y_RNA.123-201ENST00000363338 102 ntBASIC2.56□□□□□ -2
ZIC3O60481 SNORA41-201ENST00000384675 132 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms