Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.2□□□□□ -1.74
GRIN3BO60391 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
GRIN3BO60391 RNU6-806P-201ENST00000365147 105 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 RNA5SP240-201ENST00000365355 128 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 Y_RNA.405-201ENST00000383979 100 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 Y_RNA.451-201ENST00000384200 100 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 Y_RNA.524-201ENST00000384564 100 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 RNU6-658P-201ENST00000384606 106 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 Y_RNA.561-201ENST00000384694 100 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 MIR3074-201ENST00000384885 81 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 MIR888-201ENST00000401186 77 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 MTHFD2P2-201ENST00000407725 247 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 HMGN2P30-201ENST00000423237 256 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 AC098831.1-201ENST00000440661 216 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 LINC01399-202ENST00000458450 244 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 VWA8P1-201ENST00000510889 176 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 RNU6-397P-201ENST00000516226 104 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 Y_RNA.706-201ENST00000516933 99 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 RNU6-182P-201ENST00000516970 105 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 AP003733.2-201ENST00000529409 171 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 GTF3AP2-201ENST00000557014 266 ntBASIC4.2□□□□□ -1.74
GRIN3BO60391 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.2□□□□□ -1.74
GRIN3BO60391 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.2□□□□□ -1.74
GRIN3BO60391 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.2□□□□□ -1.74
GRIN3BO60391 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
GRIN3BO60391 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.19□□□□□ -1.74
GRIN3BO60391 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.19□□□□□ -1.74
GRIN3BO60391 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.19□□□□□ -1.74
GRIN3BO60391 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GRIN3BO60391 IPO8P1-201ENST00000455509 3109 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RNU6-942P-201ENST00000363002 107 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RNU1-18P-201ENST00000363062 164 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 SNORA20.1-201ENST00000364790 130 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RNU4-9P-201ENST00000364951 139 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RNU6-662P-201ENST00000384253 104 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RNA5SP129-201ENST00000410276 118 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RNU6-130P-201ENST00000411112 103 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.19□□□□□ -1.74
GRIN3BO60391 TRBV12-1-201ENST00000479785 344 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.19□□□□□ -1.74
GRIN3BO60391 AC067942.3-201ENST00000512025 362 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RNU2-58P-201ENST00000516403 183 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RNA5SP309-201ENST00000516670 106 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 SNORA81.3-201ENST00000517283 198 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 MIR4524B-201ENST00000581569 115 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.19□□□□□ -1.74
GRIN3BO60391 MIR6134-201ENST00000617606 109 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
GRIN3BO60391 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GRIN3BO60391 TNPO1P3-201ENST00000436471 2662 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GRIN3BO60391 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.19□□□□□ -1.74
GRIN3BO60391 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.19□□□□□ -1.74
GRIN3BO60391 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GRIN3BO60391 MFSD8-233ENST00000641482 4860 ntBASIC4.19□□□□□ -1.74
GRIN3BO60391 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GRIN3BO60391 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.19□□□□□ -1.74
GRIN3BO60391 RNY3P4-201ENST00000384428 101 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
GRIN3BO60391 RNU6-1093P-201ENST00000391194 107 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 RPL21P75-201ENST00000396599 483 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 RPL21P28-201ENST00000401418 483 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 RN7SKP53-201ENST00000411337 315 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AL358453.1-201ENST00000422522 250 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AL590556.1-201ENST00000423231 483 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.18□□□□□ -1.74
GRIN3BO60391 EIF1P2-201ENST00000428233 350 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 RPL21P39-201ENST00000463605 483 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AC087190.1-201ENST00000484462 480 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AC107032.1-201ENST00000485945 480 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AC132942.1-201ENST00000486753 483 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AC093591.1-201ENST00000491435 481 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 RPL23AP49-201ENST00000492925 468 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 RPL21P16-201ENST00000495531 483 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 ANXA2P1-201ENST00000505539 926 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 Y_RNA.713-201ENST00000517013 96 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.18□□□□□ -1.74
GRIN3BO60391 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.18□□□□□ -1.74
GRIN3BO60391 AP002770.2-201ENST00000543613 532 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.18□□□□□ -1.74
GRIN3BO60391 ELOCP29-201ENST00000588193 334 ntBASIC4.18□□□□□ -1.74
GRIN3BO60391 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.18□□□□□ -1.74
GRIN3BO60391 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.18□□□□□ -1.74
GRIN3BO60391 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GRIN3BO60391 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.18□□□□□ -1.74
GRIN3BO60391 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GRIN3BO60391 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GRIN3BO60391 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
GRIN3BO60391 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GRIN3BO60391 RNU6-527P-201ENST00000363425 104 ntBASIC4.17□□□□□ -1.74
GRIN3BO60391 RNU6-708P-201ENST00000384217 107 ntBASIC4.17□□□□□ -1.74
GRIN3BO60391 Y_RNA.458-201ENST00000384240 102 ntBASIC4.17□□□□□ -1.74
GRIN3BO60391 Y_RNA.506-201ENST00000384494 102 ntBASIC4.17□□□□□ -1.74
GRIN3BO60391 Y_RNA.539-201ENST00000384635 107 ntBASIC4.17□□□□□ -1.74
GRIN3BO60391 RNA5SP508-201ENST00000411327 119 ntBASIC4.17□□□□□ -1.74
GRIN3BO60391 NDUFS5P4-201ENST00000412983 318 ntBASIC4.17□□□□□ -1.74
GRIN3BO60391 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.17□□□□□ -1.74
GRIN3BO60391 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.17□□□□□ -1.74
GRIN3BO60391 AC010095.1-201ENST00000443543 144 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms