Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC090897.2-201ENST00000581715 130 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTN4O43707 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.93□□□□□ -1.62
ACTN4O43707 MIR6780A-201ENST00000615089 68 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 AC106754.2-201ENST00000623006 233 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ACTN4O43707 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTN4O43707 MAPK10-263ENST00000641052 4307 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ACTN4O43707 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTN4O43707 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
ACTN4O43707 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
ACTN4O43707 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ACTN4O43707 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
ACTN4O43707 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ACTN4O43707 Y_RNA.120-201ENST00000363304 110 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 RNU6-1336P-201ENST00000383886 109 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 SNORA48.5-201ENST00000391143 135 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 MLLT10P1-201ENST00000418346 262 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 RPEP3-201ENST00000425462 676 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 TOMM22P2-201ENST00000430735 237 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 AC011753.3-201ENST00000443436 406 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 PPBPP1-201ENST00000510807 373 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 RNU6-581P-201ENST00000516214 105 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 AC107918.3-201ENST00000533272 382 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 MIR3923-201ENST00000579521 83 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 AL451007.1-201ENST00000595491 289 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 AC015813.4-201ENST00000610469 179 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 uc_338.28-201ENST00000612082 187 ntBASIC4.92□□□□□ -1.62
ACTN4O43707 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
ACTN4O43707 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ACTN4O43707 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTN4O43707 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ACTN4O43707 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ACTN4O43707 RNU6-884P-201ENST00000363889 107 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 RN7SKP280-201ENST00000364196 304 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 RNU6-1164P-201ENST00000364428 107 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 MIR548A1-201ENST00000385041 97 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 MIR3065-201ENST00000390137 79 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 RNU6-1197P-201ENST00000391183 107 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 SNORD66.1-201ENST00000391230 76 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 CBX3P9-201ENST00000402326 552 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 RPS23P1-201ENST00000491662 432 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 RNU6-1282P-201ENST00000516735 96 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 RNU1-117P-201ENST00000517041 158 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 AC027176.1-201ENST00000560204 514 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 AC025281.1-201ENST00000567026 265 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.91□□□□□ -1.62
ACTN4O43707 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.91□□□□□ -1.62
ACTN4O43707 AC079587.1-201ENST00000603846 277 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 AC068205.3-201ENST00000636385 468 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
ACTN4O43707 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.91□□□□□ -1.62
ACTN4O43707 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACTN4O43707 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACTN4O43707 MFSD8-216ENST00000641147 4009 ntBASIC4.91□□□□□ -1.62
ACTN4O43707 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTN4O43707 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
ACTN4O43707 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACTN4O43707 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
ACTN4O43707 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ACTN4O43707 RNA5SP515-201ENST00000364570 118 ntBASIC4.9□□□□□ -1.63
ACTN4O43707 RNU1-64P-201ENST00000365443 163 ntBASIC4.9□□□□□ -1.63
ACTN4O43707 HLA-N-201ENST00000437516 135 ntBASIC4.9□□□□□ -1.63
ACTN4O43707 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.9□□□□□ -1.63
ACTN4O43707 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.9□□□□□ -1.63
ACTN4O43707 RPS29P2-201ENST00000479278 136 ntBASIC4.9□□□□□ -1.63
ACTN4O43707 SNORA70.12-201ENST00000516084 153 ntBASIC4.9□□□□□ -1.63
ACTN4O43707 RNU6-344P-201ENST00000516635 111 ntBASIC4.9□□□□□ -1.63
ACTN4O43707 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.9□□□□□ -1.63
ACTN4O43707 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.9□□□□□ -1.63
ACTN4O43707 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.9□□□□□ -1.63
ACTN4O43707 AC025754.2-201ENST00000606491 432 ntBASIC4.9□□□□□ -1.63
ACTN4O43707 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
ACTN4O43707 U6.115-201ENST00000636045 103 ntBASIC4.9□□□□□ -1.63
ACTN4O43707 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTN4O43707 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTN4O43707 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTN4O43707 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTN4O43707 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ACTN4O43707 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ACTN4O43707 RNA5SP28-201ENST00000363841 119 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 RNU6-622P-201ENST00000384272 103 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.89□□□□□ -1.63
ACTN4O43707 AC073264.2-201ENST00000448886 166 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 AL162591.2-201ENST00000449634 317 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 Y_RNA.649-201ENST00000459077 103 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 RPL35AP15-201ENST00000468042 339 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 AIG1P1-201ENST00000503376 148 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.89□□□□□ -1.63
ACTN4O43707 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.89□□□□□ -1.63
ACTN4O43707 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.89□□□□□ -1.63
ACTN4O43707 ARF4P1-201ENST00000605447 541 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.89□□□□□ -1.63
ACTN4O43707 AC018692.3-201ENST00000623929 123 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.89□□□□□ -1.63
ACTN4O43707 MIR6715B-201ENST00000637172 77 ntBASIC4.89□□□□□ -1.63
ACTN4O43707 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACTN4O43707 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms