Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR1468-201ENST00000410600 86 ntBASIC0.1□□□□□ -2.39
CHD1O14646 GPM6BP2-201ENST00000432046 144 ntBASIC0.1□□□□□ -2.39
CHD1O14646 GPM6BP1-201ENST00000446387 144 ntBASIC0.1□□□□□ -2.39
CHD1O14646 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.1□□□□□ -2.39
CHD1O14646 AC130509.1-201ENST00000464158 433 ntBASIC0.1□□□□□ -2.39
CHD1O14646 MTCO1P31-201ENST00000506355 492 ntBASIC0.1□□□□□ -2.39
CHD1O14646 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.1□□□□□ -2.39
CHD1O14646 AP003392.2-201ENST00000527269 208 ntBASIC0.1□□□□□ -2.39
CHD1O14646 AC093249.1-201ENST00000567049 203 ntBASIC0.1□□□□□ -2.39
CHD1O14646 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.1□□□□□ -2.39
CHD1O14646 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.1□□□□□ -2.39
CHD1O14646 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
CHD1O14646 Y_RNA.551-201ENST00000384661 102 ntBASIC0.1□□□□□ -2.39
CHD1O14646 MTND1P21-201ENST00000412991 285 ntBASIC0.1□□□□□ -2.39
CHD1O14646 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.1□□□□□ -2.39
CHD1O14646 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CHD1O14646 EIF1P4-201ENST00000572664 335 ntBASIC0.1□□□□□ -2.39
CHD1O14646 AC137800.2-201ENST00000574375 120 ntBASIC0.1□□□□□ -2.39
CHD1O14646 AC025627.3-201ENST00000582078 182 ntBASIC0.1□□□□□ -2.39
CHD1O14646 AL355598.1-201ENST00000604169 202 ntBASIC0.1□□□□□ -2.39
CHD1O14646 BNIP3P31-201ENST00000604515 566 ntBASIC0.1□□□□□ -2.39
CHD1O14646 AL162730.1-201ENST00000605734 292 ntBASIC0.1□□□□□ -2.39
CHD1O14646 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CHD1O14646 RNU6-1327P-201ENST00000365302 105 ntBASIC0.09□□□□□ -2.4
CHD1O14646 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
CHD1O14646 AC002429.1-201ENST00000437672 148 ntBASIC0.09□□□□□ -2.4
CHD1O14646 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.09□□□□□ -2.4
CHD1O14646 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.09□□□□□ -2.4
CHD1O14646 AL050341.1-201ENST00000447743 313 ntBASIC0.09□□□□□ -2.4
CHD1O14646 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.09□□□□□ -2.4
CHD1O14646 AC010460.2-201ENST00000509054 677 ntBASIC0.09□□□□□ -2.4
CHD1O14646 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.09□□□□□ -2.4
CHD1O14646 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.09□□□□□ -2.4
CHD1O14646 AC016256.1-201ENST00000547971 354 ntBASIC0.09□□□□□ -2.4
CHD1O14646 MIR4782-201ENST00000577987 79 ntBASIC0.09□□□□□ -2.4
CHD1O14646 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.09□□□□□ -2.4
CHD1O14646 AC106858.1-201ENST00000637497 429 ntBASIC0.09□□□□□ -2.4
CHD1O14646 SNORD114-16-201ENST00000363044 70 ntBASIC0.08□□□□□ -2.4
CHD1O14646 RNU6-1019P-201ENST00000364424 107 ntBASIC0.08□□□□□ -2.4
CHD1O14646 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CHD1O14646 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.08□□□□□ -2.4
CHD1O14646 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.08□□□□□ -2.4
CHD1O14646 AC002542.1-201ENST00000440683 193 ntBASIC0.08□□□□□ -2.4
CHD1O14646 RPS26P45-201ENST00000471748 340 ntBASIC0.08□□□□□ -2.4
CHD1O14646 RPL23AP54-201ENST00000495129 419 ntBASIC0.08□□□□□ -2.4
CHD1O14646 RNA5SP481-201ENST00000516814 122 ntBASIC0.08□□□□□ -2.4
CHD1O14646 AC104417.1-201ENST00000523974 751 ntBASIC0.08□□□□□ -2.4
CHD1O14646 AP003049.1-201ENST00000529418 457 ntBASIC0.08□□□□□ -2.4
CHD1O14646 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD1O14646 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.08□□□□□ -2.4
CHD1O14646 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD1O14646 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD1O14646 AC018926.1-201ENST00000616335 435 ntBASIC0.08□□□□□ -2.4
CHD1O14646 Y_RNA.457-201ENST00000384237 111 ntBASIC0.07□□□□□ -2.4
CHD1O14646 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
CHD1O14646 RPS3AP1-201ENST00000413190 320 ntBASIC0.07□□□□□ -2.4
CHD1O14646 HMGN2P22-201ENST00000427588 175 ntBASIC0.07□□□□□ -2.4
CHD1O14646 BRK1P2-201ENST00000442875 223 ntBASIC0.07□□□□□ -2.4
CHD1O14646 MTND2P4-201ENST00000445034 1004 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD1O14646 AC022493.2-201ENST00000506122 481 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD1O14646 AC018630.3-201ENST00000542637 96 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AC073410.2-201ENST00000603240 332 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AC017083.3-201ENST00000609955 700 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AC080188.3-201ENST00000624842 748 ntBASIC0.07□□□□□ -2.4
CHD1O14646 MTATP6P27-201ENST00000416987 621 ntBASIC0.07□□□□□ -2.4
CHD1O14646 MTCO2P12-201ENST00000427426 682 ntBASIC0.07□□□□□ -2.4
CHD1O14646 RPL37P21-201ENST00000435890 276 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.07□□□□□ -2.4
CHD1O14646 RPS29P8-201ENST00000445109 171 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD1O14646 RNU6-1183P-201ENST00000517054 60 ntBASIC0.07□□□□□ -2.4
CHD1O14646 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD1O14646 AL353765.1-201ENST00000605514 183 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AP001596.2-201ENST00000608410 312 ntBASIC0.07□□□□□ -2.4
CHD1O14646 AL360219.1-201ENST00000610230 366 ntBASIC0.07□□□□□ -2.4
CHD1O14646 LINC02555-201ENST00000563933 1951 ntBASIC0.06□□□□□ -2.4
CHD1O14646 RNU6-1210P-201ENST00000363775 107 ntBASIC0.06□□□□□ -2.4
CHD1O14646 RNU6-637P-201ENST00000384050 107 ntBASIC0.06□□□□□ -2.4
CHD1O14646 RNU6-48P-201ENST00000384161 107 ntBASIC0.06□□□□□ -2.4
CHD1O14646 RNU6-1176P-201ENST00000390955 107 ntBASIC0.06□□□□□ -2.4
CHD1O14646 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.06□□□□□ -2.4
CHD1O14646 MTCO3P1-205ENST00000422088 832 ntBASIC0.06□□□□□ -2.4
CHD1O14646 AC093422.3-201ENST00000428506 305 ntBASIC0.06□□□□□ -2.4
CHD1O14646 AC016717.1-201ENST00000448918 286 ntBASIC0.06□□□□□ -2.4
CHD1O14646 SNORD79.1-201ENST00000516069 84 ntBASIC0.06□□□□□ -2.4
CHD1O14646 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.06□□□□□ -2.4
CHD1O14646 RSL24D1P11-201ENST00000591045 491 ntBASIC0.06□□□□□ -2.4
CHD1O14646 AC010615.1-201ENST00000594254 1764 ntBASIC0.06□□□□□ -2.4
CHD1O14646 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.05□□□□□ -2.4
CHD1O14646 MIR16-1-201ENST00000385271 89 ntBASIC0.05□□□□□ -2.4
CHD1O14646 SNORD12-201ENST00000391002 90 ntBASIC0.05□□□□□ -2.4
CHD1O14646 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.05□□□□□ -2.4
CHD1O14646 SNORD99-201ENST00000408612 74 ntBASIC0.05□□□□□ -2.4
CHD1O14646 UBE2V1P11-201ENST00000411559 285 ntBASIC0.05□□□□□ -2.4
CHD1O14646 AC104651.1-201ENST00000427559 735 ntBASIC0.05□□□□□ -2.4
CHD1O14646 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.05□□□□□ -2.4
CHD1O14646 MTND1P9-201ENST00000453775 944 ntBASIC0.05□□□□□ -2.4
CHD1O14646 AC048334.1-201ENST00000477975 159 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms