Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC022513.1-201ENST00000624512 117 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
UBFD1O14562 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
UBFD1O14562 RNU4-1-201ENST00000363925 141 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 RNU6-371P-201ENST00000364283 108 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.04□□□□□ -2.24
UBFD1O14562 RPL37P21-201ENST00000435890 276 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 RPL22P17-201ENST00000438729 315 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 AL022238.1-201ENST00000442557 355 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.04□□□□□ -2.24
UBFD1O14562 AP000797.1-201ENST00000478870 387 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 RPL30P1-201ENST00000488676 339 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.04□□□□□ -2.24
UBFD1O14562 SNORA31.17-201ENST00000516953 127 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.04□□□□□ -2.24
UBFD1O14562 MIR3169-201ENST00000578032 83 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 FAM106DP-201ENST00000586416 501 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 AC092106.3-201ENST00000611308 722 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 AC012409.4-201ENST00000612923 249 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 AL359547.2-201ENST00000615810 418 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 U6.42-201ENST00000618440 107 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
UBFD1O14562 ZNF680P1-201ENST00000436625 1469 ntBASIC1.04□□□□□ -2.24
UBFD1O14562 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.04□□□□□ -2.24
UBFD1O14562 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 RNU6-1200P-201ENST00000384162 107 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 MTCO2P23-201ENST00000425216 680 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AL669831.1-202ENST00000428504 417 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AC084290.1-201ENST00000434995 374 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.03□□□□□ -2.24
UBFD1O14562 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.03□□□□□ -2.24
UBFD1O14562 MTND1P12-201ENST00000455231 147 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.03□□□□□ -2.24
UBFD1O14562 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 RNU7-51P-201ENST00000516560 62 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.03□□□□□ -2.24
UBFD1O14562 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.03□□□□□ -2.24
UBFD1O14562 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
UBFD1O14562 AC104073.3-201ENST00000610942 955 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AC104010.1-201ENST00000616889 150 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AC099842.1-201ENST00000619919 596 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AL031667.3-201ENST00000620124 655 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AP002371.2-201ENST00000624450 503 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 AC010608.3-201ENST00000625048 527 ntBASIC1.03□□□□□ -2.24
UBFD1O14562 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UBFD1O14562 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.02□□□□□ -2.25
UBFD1O14562 OR4G2P-201ENST00000328113 903 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.02□□□□□ -2.25
UBFD1O14562 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
UBFD1O14562 Y_RNA.99-201ENST00000363138 105 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 RNU6-23P-201ENST00000363283 107 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 SNORA62.1-201ENST00000364287 154 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 SNORA24.1-201ENST00000384401 135 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 MIR29B2-201ENST00000385055 81 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
UBFD1O14562 EEF1A1P40-201ENST00000412883 573 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 BTF3L4P1-201ENST00000413813 468 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC006366.1-201ENST00000422002 759 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC000111.3-201ENST00000433478 193 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC007969.2-201ENST00000441891 191 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 MTND2P4-201ENST00000445034 1004 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AL035666.1-201ENST00000446195 348 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 RPL39P29-201ENST00000447779 157 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AL590365.1-201ENST00000450788 243 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.02□□□□□ -2.25
UBFD1O14562 MTND4LP18-201ENST00000526864 291 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC011979.2-201ENST00000527568 352 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.02□□□□□ -2.25
UBFD1O14562 AP002453.2-201ENST00000533503 320 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.02□□□□□ -2.25
UBFD1O14562 AC016957.1-201ENST00000534895 309 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 ADI1P3-201ENST00000549509 470 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AL137100.2-201ENST00000555786 315 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.02□□□□□ -2.25
UBFD1O14562 SUB1P4-201ENST00000566062 339 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 MIR151B-201ENST00000584249 96 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC105148.1-201ENST00000604961 409 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC007792.1-201ENST00000623023 402 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC097372.5-201ENST00000623665 376 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 AC120349.3-201ENST00000624377 529 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 SCARNA4-202ENST00000625402 129 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.02□□□□□ -2.25
UBFD1O14562 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.02□□□□□ -2.25
UBFD1O14562 AL445984.1-201ENST00000637834 659 ntBASIC1.02□□□□□ -2.25
UBFD1O14562 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
UBFD1O14562 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.01□□□□□ -2.25
UBFD1O14562 AL391994.1-201ENST00000254724 282 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 MIR520E-201ENST00000384867 87 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 SNORA12-201ENST00000391162 147 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 MTCYBP36-201ENST00000404146 440 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 RPL21P90-201ENST00000415692 466 ntBASIC1.01□□□□□ -2.25
UBFD1O14562 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms