Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SNORD114-6-201ENST00000364393 72 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 SNORD32B-201ENST00000364460 84 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
AP3B1O00203 SNORA20.2-201ENST00000383922 131 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 SNORA67.5-201ENST00000391036 107 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 RNU2-3P-201ENST00000410144 191 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 RNU2-8P-201ENST00000410727 190 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3B1O00203 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3B1O00203 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3B1O00203 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3B1O00203 HMGN2P18-201ENST00000450680 270 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 AC116562.3-201ENST00000506136 177 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 MTND3P5-201ENST00000512798 333 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 RNA5SP445-201ENST00000515889 115 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 AC068587.5-201ENST00000528506 175 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.52□□□□□ -2.17
AP3B1O00203 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.52□□□□□ -2.17
AP3B1O00203 AC009977.1-201ENST00000586015 570 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 AL022161.1-201ENST00000604390 213 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 AC027449.1-201ENST00000608890 407 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP3B1O00203 AC004223.4-201ENST00000612426 332 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 AC009159.2-201ENST00000617603 606 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 AC091304.6-201ENST00000619761 202 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 U4.7-201ENST00000638126 106 ntBASIC1.52□□□□□ -2.17
AP3B1O00203 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP3B1O00203 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 RNU6-169P-201ENST00000365336 107 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 RNU6-26P-201ENST00000383985 107 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 Y_RNA.576-201ENST00000384781 102 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 RNU6-607P-201ENST00000411283 108 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 EBAG9P1-201ENST00000418955 543 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.51□□□□□ -2.17
AP3B1O00203 AL513185.2-201ENST00000425543 193 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 AC104850.1-201ENST00000435940 476 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 UBE2D3P4-201ENST00000441973 436 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 snoU13.26-201ENST00000459452 105 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.51□□□□□ -2.17
AP3B1O00203 RNU2-46P-201ENST00000517038 113 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 AP005597.4-201ENST00000526762 229 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.51□□□□□ -2.17
AP3B1O00203 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
AP3B1O00203 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.51□□□□□ -2.17
AP3B1O00203 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 AL136370.1-201ENST00000608166 691 ntBASIC1.51□□□□□ -2.17
AP3B1O00203 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.51□□□□□ -2.17
AP3B1O00203 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
AP3B1O00203 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
AP3B1O00203 AP000560.1-201ENST00000624150 1937 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
AP3B1O00203 RNU6-1285P-201ENST00000363480 105 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 RNU6-112P-201ENST00000363599 104 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 RNU4-56P-201ENST00000364700 142 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 MIR1289-2-201ENST00000408360 111 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 Y_RNA.598-201ENST00000410480 95 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 CYCSP33-201ENST00000414485 327 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 AC123900.1-201ENST00000420390 96 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
AP3B1O00203 KATNBL1P3-201ENST00000443475 909 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 MTND2P4-201ENST00000445034 1004 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.5□□□□□ -2.17
AP3B1O00203 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.5□□□□□ -2.17
AP3B1O00203 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.5□□□□□ -2.17
AP3B1O00203 FABP5P5-201ENST00000515537 406 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.5□□□□□ -2.17
AP3B1O00203 AP003034.1-201ENST00000534621 422 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.5□□□□□ -2.17
AP3B1O00203 AC027807.1-201ENST00000559921 996 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 AC138649.3-201ENST00000622154 254 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 AC068787.1-201ENST00000623908 691 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 AC120349.3-201ENST00000624377 529 ntBASIC1.5□□□□□ -2.17
AP3B1O00203 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
AP3B1O00203 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
AP3B1O00203 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 RNA5SP190-201ENST00000365222 118 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 SNORD115-7-201ENST00000365306 82 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
AP3B1O00203 RNU6-142P-201ENST00000384019 107 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 MTCO3P46-201ENST00000425787 232 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.49□□□□□ -2.17
AP3B1O00203 UBE2V1P8-201ENST00000437166 265 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.49□□□□□ -2.17
AP3B1O00203 RPL36AP21-201ENST00000490372 323 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 AC145146.1-201ENST00000496370 254 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.49□□□□□ -2.17
AP3B1O00203 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.49□□□□□ -2.17
AP3B1O00203 AC005178.1-201ENST00000508392 440 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 SNORA3.4-201ENST00000515969 96 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 RNU6-902P-201ENST00000517212 91 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 SUMO2P18-201ENST00000518873 252 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 AC090572.1-201ENST00000519251 160 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.49□□□□□ -2.17
AP3B1O00203 MIR5094-201ENST00000578766 85 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 AL158827.2-201ENST00000602494 330 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms