Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SNORA75.3-201ENST00000391231 150 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AC005094.1-201ENST00000440420 368 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AC020550.1-201ENST00000447385 163 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AL049830.1-201ENST00000468034 425 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 MTCO1P31-201ENST00000506355 492 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AK3P2-201ENST00000507976 429 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AC011406.1-201ENST00000512440 370 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AC098483.2-201ENST00000603158 454 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 SGO1P1-201ENST00000603525 1447 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AL162730.1-201ENST00000605734 292 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AL355816.2-201ENST00000610049 647 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AC073349.3-201ENST00000617616 186 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 MIR4315-1-201ENST00000636800 73 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 U6.101-201ENST00000637707 76 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 MIR4315-2-201ENST00000640925 73 ntBASIC-0.17□□□□□ -2.44
CPSF4LA6NMK7 AC245060.5-201ENST00000610778 3293 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 CASC19-280ENST00000642102 1351 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC092268.1-201ENST00000342691 405 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 RNU6-582P-201ENST00000362989 107 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 RNU6-637P-201ENST00000384050 107 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 RNU6-700P-201ENST00000391043 107 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AL355796.1-201ENST00000406706 323 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AL359704.1-201ENST00000411586 781 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 MTCO3P1-205ENST00000422088 832 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 RPS15AP10-201ENST00000432472 382 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 MTATP6P30-201ENST00000443540 664 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 snoU13.18-201ENST00000459483 104 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC009646.1-201ENST00000510455 318 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC005741.1-201ENST00000511094 432 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC027338.1-201ENST00000514840 825 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 RNU6-885P-201ENST00000516607 104 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC090502.2-201ENST00000549267 280 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC104229.1-201ENST00000561364 255 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 MIR4742-201ENST00000581069 85 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 MIR5190-201ENST00000581537 80 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC025627.3-201ENST00000582078 182 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AL353778.1-201ENST00000603149 408 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 SNRPGP20-201ENST00000604477 205 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC116165.2-201ENST00000616705 206 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 AC091925.1-201ENST00000623204 462 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 U6.99-201ENST00000637524 83 ntBASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.18□□□□□ -2.44
CPSF4LA6NMK7 MTND4P5-201ENST00000435821 1374 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 RNU6-252P-201ENST00000363232 107 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 RNU6-891P-201ENST00000384280 111 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AL357139.1-201ENST00000407792 426 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 RNA5SP222-201ENST00000411039 105 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 RNU6-177P-201ENST00000411257 104 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 ELOCP9-201ENST00000418624 239 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 MTND2P21-201ENST00000436242 1042 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 RNU7-90P-201ENST00000459216 62 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 U7.7-201ENST00000459276 60 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 MED28P2-201ENST00000475771 317 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC048346.1-201ENST00000510247 144 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC091163.3-201ENST00000518269 1144 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC093519.1-201ENST00000566109 298 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 MIR4709-201ENST00000577272 72 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC011195.1-201ENST00000578177 177 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC068620.3-201ENST00000602749 560 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AL357312.1-201ENST00000603879 298 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 AC008759.3-201ENST00000613300 508 ntBASIC-0.19□□□□□ -2.44
CPSF4LA6NMK7 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 RNU6-862P-201ENST00000362804 105 ntBASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 RNU6-487P-201ENST00000365430 104 ntBASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 RNU6-622P-201ENST00000384272 103 ntBASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 SNORD116-13-201ENST00000384408 92 ntBASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 COX6CP10-201ENST00000416832 224 ntBASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.2□□□□□ -2.44
CPSF4LA6NMK7 VN1R10P-201ENST00000447106 875 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms