Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 RNU6-1329P-201ENST00000365664 107 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 RNU6-214P-201ENST00000384130 107 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 RNU6-1106P-201ENST00000390845 107 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AL356057.3-201ENST00000402607 340 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 RNA5SP390-201ENST00000410191 113 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 NDUFA5P4-201ENST00000436704 385 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AC011816.1-201ENST00000441346 546 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AL359672.1-201ENST00000442302 409 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AMD1P1-201ENST00000457220 922 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 FAM206BP-201ENST00000510179 541 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 RNA5SP282-201ENST00000516355 108 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 RNU6-1314P-201ENST00000517139 104 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AC093249.1-201ENST00000567049 203 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 SNORA59B-202ENST00000578183 701 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 MIR4513-201ENST00000581077 86 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AC244517.12-201ENST00000623581 663 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 AC121333.1-201ENST00000567488 2709 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 snoU2_19.1-201ENST00000362361 80 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 RNU6-1010P-201ENST00000362757 107 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 RNU1-72P-201ENST00000362976 153 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 SNORD113-7-201ENST00000363762 77 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 U6atac.2-201ENST00000408644 118 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 RNU2-23P-201ENST00000410545 195 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 RNU2-52P-201ENST00000410680 190 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 VN1R36P-201ENST00000414936 291 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 CYCSP48-201ENST00000417124 323 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC009161.1-201ENST00000417306 376 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 USP9YP20-201ENST00000419224 558 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 RPL30P16-201ENST00000419341 429 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AL513185.2-201ENST00000425543 193 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC124916.1-201ENST00000444020 547 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC013470.1-201ENST00000453438 462 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AL139109.1-201ENST00000455491 297 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 SRIP1-201ENST00000489235 288 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC107953.1-201ENST00000522216 297 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC026371.1-201ENST00000551867 419 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 MIR5571-201ENST00000577998 113 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 MIR3942-201ENST00000585264 109 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC060766.3-201ENST00000591442 263 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC068944.2-201ENST00000610373 403 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 HMGB1P24-202ENST00000615653 685 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AL136221.1-201ENST00000621449 509 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 AC007792.1-201ENST00000623023 402 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 MIR203B-201ENST00000636080 86 ntBASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.16□□□□□ -2.06
NKX6-3A6NJ46 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
NKX6-3A6NJ46 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.15□□□□□ -2.06
NKX6-3A6NJ46 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 RNU6-655P-201ENST00000362858 107 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 Y_RNA.100-201ENST00000363141 102 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 RNU6-1317P-201ENST00000364582 104 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 Y_RNA.414-201ENST00000384011 101 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 RNU6-831P-201ENST00000384548 107 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 Y_RNA.530-201ENST00000384587 101 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AL590632.1-201ENST00000424289 371 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 MTND3P9-201ENST00000429526 346 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 RPS15AP10-201ENST00000432472 382 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 MTCO3P18-201ENST00000440206 761 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AL031659.1-201ENST00000447075 539 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 RNU7-66P-201ENST00000459469 62 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AC018437.1-201ENST00000492214 406 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AC018710.1-201ENST00000506509 158 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AC091874.1-201ENST00000511402 339 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 CKS1BP7-201ENST00000522230 235 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 COPS8P3-201ENST00000526024 482 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 TRAV32-201ENST00000553993 340 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 PSMA3P-201ENST00000555485 635 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AL137847.3-201ENST00000611521 109 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AC245884.12-201ENST00000615364 59 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AC009233.1-201ENST00000616477 371 ntBASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.15□□□□□ -2.07
NKX6-3A6NJ46 MTND4P23-201ENST00000447723 1363 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 Y_RNA.157-201ENST00000363638 102 ntBASIC2.14□□□□□ -2.07
NKX6-3A6NJ46 U3.12-201ENST00000364498 214 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms