Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC114982.1-201ENST00000469402 321 ntBASIC0.64□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR449C-201ENST00000516047 92 ntBASIC0.64□□□□□ -2.31
TCRBV4S1A1TA0A5B7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.64□□□□□ -2.31
TCRBV4S1A1TA0A5B7 VN1R82P-201ENST00000601481 356 ntBASIC0.64□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AP000654.2-201ENST00000605633 586 ntBASIC0.64□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC108706.1-201ENST00000611053 297 ntBASIC0.64□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL512427.1-201ENST00000618593 349 ntBASIC0.64□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL391516.1-201ENST00000554380 2449 ntBASIC0.64□□□□□ -2.31
TCRBV4S1A1TA0A5B7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-560P-201ENST00000364007 108 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR613-201ENST00000385248 95 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 PRPS1P1-201ENST00000445305 876 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 Y_RNA.687-201ENST00000516558 91 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNA5SP384-201ENST00000516615 116 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-1092P-201ENST00000516955 87 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR3146-201ENST00000580367 79 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL391001.1-201ENST00000602747 715 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL596327.1-201ENST00000603629 213 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC112220.3-201ENST00000605502 502 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC007792.1-201ENST00000623023 402 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC027335.2-201ENST00000624030 375 ntBASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.63□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR412-201ENST00000362142 91 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU1-124P-201ENST00000363861 145 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 Y_RNA.354-201ENST00000365448 111 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-190P-201ENST00000384154 102 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR598-201ENST00000384868 97 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 CST2P1-201ENST00000425770 87 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC245047.4-201ENST00000433189 144 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 NDUFB1P2-201ENST00000449477 176 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNA5SP269-201ENST00000459032 137 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC103851.1-201ENST00000506833 274 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 UBL5P1-201ENST00000507979 193 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC079395.1-201ENST00000510981 262 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC112206.3-201ENST00000514578 389 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SNORD116-28-201ENST00000516123 91 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SNORA43.2-201ENST00000516652 128 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL512310.8-201ENST00000550183 120 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 HMGB1P33-201ENST00000563485 527 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC136932.1-201ENST00000574771 208 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC091135.1-201ENST00000585943 307 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MZT1P2-201ENST00000604387 248 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC090578.1-201ENST00000604955 591 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 BCRP9-201ENST00000605312 388 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL020996.3-201ENST00000606617 222 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC012676.2-201ENST00000619258 186 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC024940.5-201ENST00000622889 474 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC092104.1-201ENST00000497346 1441 ntBASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.62□□□□□ -2.31
TCRBV4S1A1TA0A5B7 OR4G2P-201ENST00000328113 903 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-462P-201ENST00000362659 105 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SNORD56.1-201ENST00000362913 68 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6-511P-201ENST00000363496 107 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 Y_RNA.192-201ENST00000363977 102 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SNORD32B-201ENST00000364460 84 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 Y_RNA.255-201ENST00000364581 97 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 MIR520A-201ENST00000384862 85 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SNORA12-201ENST00000391162 147 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 FTH1P12-201ENST00000432137 551 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC099677.2-201ENST00000436385 175 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL122001.1-201ENST00000457027 370 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 BNIP3P6-201ENST00000549284 499 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL138889.2-201ENST00000603883 242 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AL136363.2-201ENST00000604173 851 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 BNIP3P31-201ENST00000604515 566 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 SCARNA4-202ENST00000625402 129 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 AC099654.5-201ENST00000636479 350 ntBASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TCRBV4S1A1TA0A5B7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms