Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MTND5P16-201ENST00000460269 1703 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-1159P-201ENST00000362933 107 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 RHOT1P2-201ENST00000366423 333 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 SNORD21-201ENST00000383953 95 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 MIR128-1-201ENST00000384921 82 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 AC090525.1-201ENST00000479116 478 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 AF186996.7-201ENST00000492781 209 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 SNORA31.16-201ENST00000516773 139 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 Y_RNA.721-201ENST00000517207 102 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 RPL23AP88-201ENST00000605759 454 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 AL138825.1-201ENST00000618587 192 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 AC002064.3-201ENST00000623448 346 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 MAPK10-373ENST00000641983 6772 ntBASIC3.61□□□□□ -1.83
CCDC163A0A0D9SF12 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 MAPK10-253ENST00000641010 4072 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AC092268.1-201ENST00000342691 405 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-1309P-201ENST00000363305 108 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 SNORA48.5-201ENST00000391143 135 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 Y_RNA.592-201ENST00000410274 109 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 RN7SKP61-201ENST00000410642 295 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 RPL31P61-201ENST00000496160 376 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AC091144.1-201ENST00000519573 138 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AC115990.1-201ENST00000526957 301 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AC021231.3-201ENST00000558497 370 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AC008269.2-201ENST00000561915 1105 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 RPS29P30-201ENST00000600975 111 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-91P-201ENST00000607774 107 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 MTND5P27-201ENST00000428871 1720 ntBASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CCDC163A0A0D9SF12 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-222P-201ENST00000362438 107 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 RNU4-35P-201ENST00000362588 141 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-1285P-201ENST00000363480 105 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 SNORD74.4-201ENST00000364129 80 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 SNORA51.11-201ENST00000384442 131 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-823P-201ENST00000391042 103 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AL049873.1-201ENST00000480540 376 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AIG1P1-201ENST00000503376 148 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 BTF3L4P4-201ENST00000506381 449 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 RNU6-475P-201ENST00000516073 104 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 RN7SKP282-201ENST00000516824 299 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AC040926.1-201ENST00000530195 238 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 MIR4325-201ENST00000583049 90 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AC004832.5-201ENST00000608677 401 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AL078596.1-201ENST00000624856 447 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 AC138305.3-201ENST00000624988 240 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 SNORD98-201ENST00000636377 67 ntBASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC163A0A0D9SF12 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
CCDC163A0A0D9SF12 FAM35DP-201ENST00000323387 2712 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 RNU4-56P-201ENST00000364700 142 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 Y_RNA.557-201ENST00000384680 107 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 MIR153-2-201ENST00000385225 87 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 HLFP1-201ENST00000402375 499 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 AL358075.3-201ENST00000426289 226 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 AL445305.1-201ENST00000432577 575 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 AC025554.1-201ENST00000505641 188 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 RNA5SP208-201ENST00000516156 78 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 SNORA40.14-201ENST00000516543 86 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 AC022868.1-201ENST00000517767 391 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 MIR4765-201ENST00000585007 77 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 AC016727.2-201ENST00000603988 621 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 uc_338.14-201ENST00000613162 166 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 MIR7112-201ENST00000616126 65 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 FAM35CP-201ENST00000554755 2470 ntBASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC163A0A0D9SF12 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms