Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.87□□□□□ -1.95
PKP3Q9Y446 RPS29P12-201ENST00000460178 152 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 AC008571.1-201ENST00000467232 300 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.87□□□□□ -1.95
PKP3Q9Y446 GZMAP1-201ENST00000503054 631 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.87□□□□□ -1.95
PKP3Q9Y446 Y_RNA.670-201ENST00000516255 105 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 SNORA31.23-201ENST00000517219 133 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 SNORA31.26-201ENST00000517250 137 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.87□□□□□ -1.95
PKP3Q9Y446 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.87□□□□□ -1.95
PKP3Q9Y446 AC109446.1-201ENST00000566172 220 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 AL133255.1-201ENST00000606374 441 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 AC133104.2-201ENST00000615272 193 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 AL160413.1-201ENST00000622780 310 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 AC241585.2-209ENST00000638217 143 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PKP3Q9Y446 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PKP3Q9Y446 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
PKP3Q9Y446 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PKP3Q9Y446 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
PKP3Q9Y446 RBBP8P1-201ENST00000449447 1844 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
PKP3Q9Y446 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PKP3Q9Y446 RNU6-1059P-201ENST00000363752 98 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 Y_RNA.813-201ENST00000364639 102 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 Y_RNA.315-201ENST00000365117 102 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 RNU6-487P-201ENST00000365430 104 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 MIR181B1-201ENST00000385240 110 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 MIR1289-1-201ENST00000408836 144 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 AL451074.5-201ENST00000415894 435 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 AC009414.1-201ENST00000427200 443 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 SAR1AP4-201ENST00000429225 591 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 FTH1P25-201ENST00000447665 469 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 RPL30P15-201ENST00000457129 321 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 RPS26P21-201ENST00000475397 348 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 RPL7P42-201ENST00000481005 679 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 RAC1P5-201ENST00000512182 576 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 SCARNA13-201ENST00000516672 275 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 RNU6-1213P-201ENST00000517075 94 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.86□□□□□ -1.95
PKP3Q9Y446 AC011494.1-201ENST00000596454 237 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 AC090115.4-201ENST00000609970 188 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 MIR8076-201ENST00000611401 83 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.86□□□□□ -1.95
PKP3Q9Y446 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.86□□□□□ -1.95
PKP3Q9Y446 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.86□□□□□ -1.95
PKP3Q9Y446 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PKP3Q9Y446 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PKP3Q9Y446 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PKP3Q9Y446 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PKP3Q9Y446 RNU6-227P-201ENST00000362865 103 ntBASIC2.85□□□□□ -1.95
PKP3Q9Y446 U8.8-201ENST00000365399 135 ntBASIC2.85□□□□□ -1.95
PKP3Q9Y446 Y_RNA.419-201ENST00000384041 102 ntBASIC2.85□□□□□ -1.95
PKP3Q9Y446 MIR128-1-201ENST00000384921 82 ntBASIC2.85□□□□□ -1.95
PKP3Q9Y446 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 AC243964.1-201ENST00000441814 261 ntBASIC2.85□□□□□ -1.95
PKP3Q9Y446 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 RNU6-56P-201ENST00000516986 93 ntBASIC2.85□□□□□ -1.95
PKP3Q9Y446 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 AP001836.1-201ENST00000604675 523 ntBASIC2.85□□□□□ -1.95
PKP3Q9Y446 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
PKP3Q9Y446 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PKP3Q9Y446 Y_RNA.2-201ENST00000362330 96 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 RNU4-76P-201ENST00000364509 141 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 RNU6-692P-201ENST00000384496 107 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 SNORA44-201ENST00000384584 132 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 RNU6-310P-201ENST00000384655 107 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 MIR483-201ENST00000385070 76 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 SNORA48.2-201ENST00000390926 124 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 UBA52P6-201ENST00000399822 382 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 RNA5SP344-201ENST00000411081 104 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 AP000275.1-201ENST00000411943 390 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 USMG5P1-201ENST00000425964 177 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.84□□□□□ -1.95
PKP3Q9Y446 AC007969.2-201ENST00000441891 191 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.84□□□□□ -1.95
PKP3Q9Y446 OSTCP8-201ENST00000445117 448 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.84□□□□□ -1.95
PKP3Q9Y446 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.84□□□□□ -1.95
PKP3Q9Y446 AP001025.1-201ENST00000486139 332 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 AC097462.2-201ENST00000504623 481 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 SNORA74D-201ENST00000516404 141 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.84□□□□□ -1.95
PKP3Q9Y446 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.84□□□□□ -1.95
PKP3Q9Y446 AC078795.3-201ENST00000602913 472 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 AC002064.3-201ENST00000623448 346 ntBASIC2.84□□□□□ -1.95
PKP3Q9Y446 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.84□□□□□ -1.95
PKP3Q9Y446 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PKP3Q9Y446 AL355596.1-201ENST00000565399 3996 ntBASIC2.83□□□□□ -1.96
PKP3Q9Y446 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.83□□□□□ -1.96
PKP3Q9Y446 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms