Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL513475.1-201ENST00000406602 315 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 U3.37-201ENST00000408528 213 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RN7SKP58-201ENST00000411010 305 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 MTND2P23-201ENST00000422990 651 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 PMCHL1-202ENST00000423102 261 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RPL23AP50-201ENST00000434149 455 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AC025750.2-201ENST00000442609 450 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AL035666.1-201ENST00000446195 348 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 snoU109.2-201ENST00000459316 135 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-1045P-201ENST00000516321 107 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-264P-201ENST00000517134 104 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AL360085.1-201ENST00000604713 532 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AL355802.3-201ENST00000607571 545 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AC040896.1-201ENST00000613819 479 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AC091903.1-201ENST00000624322 454 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 AC093831.2-201ENST00000624393 3427 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 Y_RNA.5-201ENST00000362334 102 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-1115P-201ENST00000362490 106 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 Y_RNA.31-201ENST00000362574 102 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-331P-201ENST00000384724 107 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-174P-201ENST00000410406 106 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 HIGD1AP2-201ENST00000446367 280 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC013470.1-201ENST00000453438 462 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 BTF3P15-201ENST00000455606 336 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC128713.1-201ENST00000471495 306 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC114801.2-201ENST00000503825 781 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AK3P2-201ENST00000507976 429 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC006445.2-201ENST00000510061 472 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 PTP4A1P4-201ENST00000512479 322 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 SNORA31.1-201ENST00000515993 133 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 SNORA31.5-201ENST00000516190 133 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 SCARNA16.2-201ENST00000516520 172 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 RNA5SP384-201ENST00000516615 116 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 NACAP3-201ENST00000552100 481 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 ELOCP29-201ENST00000588193 334 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC009314.1-201ENST00000603871 304 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 U4.7-201ENST00000638126 106 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 AC004944.1-201ENST00000517807 3059 ntBASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX2IPQ9Y2D8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 Y_RNA.252-201ENST00000364556 101 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-1317P-201ENST00000364582 104 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 Z98749.2-208ENST00000381646 500 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC117470.1-201ENST00000381974 330 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-639P-201ENST00000384074 107 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 Y_RNA.463-201ENST00000384271 102 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-738P-201ENST00000384531 106 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-1160P-201ENST00000384546 104 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-308P-201ENST00000390957 107 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RPL21P75-201ENST00000396599 483 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RPL21P28-201ENST00000401418 483 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC018865.2-201ENST00000423631 129 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AL590664.1-201ENST00000448065 339 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RPL21P39-201ENST00000463605 483 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC133134.1-201ENST00000466800 359 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC087190.1-201ENST00000484462 480 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC093591.1-201ENST00000491435 481 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RPL21P16-201ENST00000495531 483 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-928P-201ENST00000516876 104 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AP004607.1-201ENST00000524456 203 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC023442.1-201ENST00000531247 422 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC103996.1-201ENST00000555468 102 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms