Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 RNU6-414P-201ENST00000363705 104 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 SNORA70-201ENST00000384436 135 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 OR2AH1P-201ENST00000425717 928 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 AL121890.1-201ENST00000435457 205 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 AL500522.2-201ENST00000448562 343 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 RPL23AP56-201ENST00000460778 453 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 RN7SL826P-201ENST00000479724 288 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 AC007751.1-201ENST00000529260 376 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 AP006289.1-201ENST00000538089 277 ntBASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS9D1Q9Y2B5 AL672296.1-201ENST00000427780 2158 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 AC103988.1-201ENST00000566382 2177 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 SNORA74A-201ENST00000364089 198 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 RN7SL97P-201ENST00000486780 299 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 RNU6-857P-201ENST00000515893 110 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 RNA5SP43-201ENST00000516559 110 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 AC019288.1-201ENST00000557918 224 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 AC027290.2-201ENST00000623210 18662 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 MAPK10-286ENST00000641208 8747 ntBASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS9D1Q9Y2B5 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 RNU6-884P-201ENST00000363889 107 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 Y_RNA.213-201ENST00000364178 111 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 RNU6-787P-201ENST00000384032 107 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 RNU6-178P-201ENST00000384631 104 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 RN7SL319P-201ENST00000480656 221 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 AC011406.1-201ENST00000512440 370 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 RN7SKP276-201ENST00000516242 268 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 AC074050.1-201ENST00000563247 211 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 RN7SL435P-201ENST00000584418 282 ntBASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS9D1Q9Y2B5 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
VPS9D1Q9Y2B5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.9□□□□□ -1.62
VPS9D1Q9Y2B5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS9D1Q9Y2B5 MIR759-201ENST00000390224 91 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 PTMAP5-201ENST00000393073 333 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 AL355796.1-201ENST00000406706 323 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 RN7SL610P-201ENST00000463845 291 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 RPS26P55-201ENST00000471178 356 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 SNORA31.8-201ENST00000516327 108 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 RN7SKP66-201ENST00000516681 231 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 RPL23AP91-201ENST00000569211 455 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 SNORA74C-1-201ENST00000580726 201 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 MIR3129-201ENST00000581095 76 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 MIR2681-201ENST00000581814 105 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 AC006116.3-201ENST00000592968 361 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 Pinc.1-201ENST00000616452 154 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 AL023881.1-201ENST00000621088 301 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 MAPK10-263ENST00000641052 4307 ntBASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS9D1Q9Y2B5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 RNU6-271P-201ENST00000363858 105 ntBASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 RN7SKP280-201ENST00000364196 304 ntBASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 RNA5SP455-201ENST00000365190 119 ntBASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 MIR1185-2-201ENST00000408687 86 ntBASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS9D1Q9Y2B5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms