Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 AL133547.1-201ENST00000448546 220 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 RNA5SP310-201ENST00000459084 116 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 AL121594.1-201ENST00000475906 575 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 RN7SKP46-201ENST00000515942 234 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 RNU6-191P-201ENST00000516295 94 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC115990.1-201ENST00000526957 301 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 AP001485.1-201ENST00000604799 199 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 AL365265.1-201ENST00000621045 234 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC091932.3-201ENST00000624223 323 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 snoU18.1-201ENST00000629629 71 ntBASIC4.58□□□□□ -1.68
NOD1Q9Y239 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NOD1Q9Y239 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NOD1Q9Y239 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NOD1Q9Y239 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.57□□□□□ -1.68
NOD1Q9Y239 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.57□□□□□ -1.68
NOD1Q9Y239 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NOD1Q9Y239 AP001642.1-201ENST00000624727 2117 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
NOD1Q9Y239 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NOD1Q9Y239 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NOD1Q9Y239 SNORA60-201ENST00000362396 134 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 RNU6-799P-201ENST00000363567 107 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 SNORD50.2-201ENST00000365465 70 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 RNU6-245P-201ENST00000384020 107 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 RNU6-211P-201ENST00000384047 107 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 SNORD66.1-201ENST00000391230 76 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NOD1Q9Y239 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.57□□□□□ -1.68
NOD1Q9Y239 SNRPGP5-201ENST00000456003 220 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 AC108751.2-201ENST00000469993 231 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 AC091179.3-201ENST00000474761 144 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 RNU6-155P-201ENST00000516347 100 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 HIGD1AP1-201ENST00000550979 275 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.57□□□□□ -1.68
NOD1Q9Y239 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NOD1Q9Y239 CUL1P1-201ENST00000509510 2425 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.57□□□□□ -1.68
NOD1Q9Y239 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NOD1Q9Y239 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NOD1Q9Y239 AC092435.4-201ENST00000623012 4159 ntBASIC4.57□□□□□ -1.68
NOD1Q9Y239 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NOD1Q9Y239 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NOD1Q9Y239 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NOD1Q9Y239 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 AL672296.1-201ENST00000427780 2158 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 RN7SKP167-201ENST00000411047 285 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 ELOCP21-201ENST00000412558 336 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NOD1Q9Y239 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 RPS4XP13-201ENST00000483219 789 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 RPL29P14-201ENST00000495837 428 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 CYP4A27P-201ENST00000567218 190 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 HMGN2P15-201ENST00000585707 270 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 AC108706.1-201ENST00000611053 297 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 AC039056.2-201ENST00000622261 511 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 AL354798.1-201ENST00000622505 329 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 SNORD98-201ENST00000636377 67 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 AC002543.1-201ENST00000299783 1954 ntBASIC4.56□□□□□ -1.68
NOD1Q9Y239 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NOD1Q9Y239 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NOD1Q9Y239 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.56□□□□□ -1.68
NOD1Q9Y239 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NOD1Q9Y239 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.55□□□□□ -1.68
NOD1Q9Y239 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.55□□□□□ -1.68
NOD1Q9Y239 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NOD1Q9Y239 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 RNU6-727P-201ENST00000363592 107 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 SNORA70.4-201ENST00000365509 134 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 RNU6-1310P-201ENST00000384153 107 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 PTMAP5-201ENST00000393073 333 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 MIR208B-201ENST00000401172 77 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 SNORA11.1-201ENST00000408133 129 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 U3.39-201ENST00000408569 239 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.55□□□□□ -1.68
NOD1Q9Y239 AL161651.1-201ENST00000440882 223 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 AC006011.1-201ENST00000442758 349 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 IFNA11P-201ENST00000446352 526 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.55□□□□□ -1.68
NOD1Q9Y239 AL591473.1-201ENST00000464297 313 ntBASIC4.55□□□□□ -1.68
NOD1Q9Y239 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.55□□□□□ -1.68
NOD1Q9Y239 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.55□□□□□ -1.68
NOD1Q9Y239 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms