Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRIT1Q9P2V4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 Y_RNA.276-201ENST00000364732 109 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 SNORA14A-201ENST00000364773 135 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 RNU6-336P-201ENST00000364891 107 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 Z98749.2-208ENST00000381646 500 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 Y_RNA.551-201ENST00000384661 102 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AL357075.1-201ENST00000404107 726 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 RNU6-121P-201ENST00000410525 99 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AC009310.1-201ENST00000414414 451 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AL078601.1-201ENST00000444542 271 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 SNORD127-201ENST00000458892 86 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 RNY3P15-201ENST00000516297 97 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 RNA5SP291-201ENST00000517222 105 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AP000867.2-201ENST00000532468 320 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AC011602.1-201ENST00000546484 331 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AMZ2P1-203ENST00000565833 850 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 MIR5047-201ENST00000579212 100 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AC004852.3-201ENST00000614131 326 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AL138825.1-201ENST00000618587 192 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 U7.8-201ENST00000619968 63 ntBASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.24□□□□□ -1.89
LRIT1Q9P2V4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 AC010615.1-201ENST00000594254 1764 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 Y_RNA.257-201ENST00000364596 102 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 RNA5SP252-201ENST00000391131 119 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 SNORA48.5-201ENST00000391143 135 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 Y_RNA.592-201ENST00000410274 109 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 RNU2-68P-201ENST00000410878 191 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 RNU6-847P-201ENST00000411115 108 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 AC098614.2-201ENST00000426040 255 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 RNU6-1132P-201ENST00000459214 107 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 U8.21-201ENST00000459536 136 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 RPL23AP67-201ENST00000465341 474 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 HSPE1P20-201ENST00000538133 289 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 CYCSP39-201ENST00000565821 309 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 AL645944.1-201ENST00000603857 493 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRIT1Q9P2V4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 AL513302.2-201ENST00000562313 1842 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 Y_RNA.19-201ENST00000362462 99 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RNU6-78P-201ENST00000362897 107 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RNA5SP374-201ENST00000362939 125 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 Y_RNA.288-201ENST00000364854 92 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RNU6-72P-201ENST00000384285 79 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RNU6-713P-201ENST00000384761 107 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RNU4-47P-201ENST00000410876 114 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RPL21P38-201ENST00000418090 167 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RPL21P40-201ENST00000428586 483 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 SNRPEP9-201ENST00000436794 238 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 Z82210.1-201ENST00000440037 231 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RPEP5-201ENST00000441137 268 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 SNORA59A-201ENST00000459326 152 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 RN7SL330P-201ENST00000469709 307 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.22□□□□□ -1.89
LRIT1Q9P2V4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms