Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNU6-142P-201ENST00000384019 107 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 Y_RNA.458-201ENST00000384240 102 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU6-17P-201ENST00000384245 107 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU6-611P-201ENST00000384276 104 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU6-18P-201ENST00000384527 107 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 MIR449B-201ENST00000384995 97 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 SETP5-201ENST00000437270 562 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AL161651.1-201ENST00000440882 223 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AL358232.1-201ENST00000448030 501 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AC010099.1-201ENST00000455434 375 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 LINC01399-202ENST00000458450 244 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AC091153.1-201ENST00000466297 402 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU6-408P-201ENST00000515910 100 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU5F-8P-201ENST00000515941 111 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU6-579P-201ENST00000516879 102 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU6-570P-201ENST00000517051 105 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RNU6-794P-201ENST00000517261 64 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AP002770.2-201ENST00000543613 532 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AC008739.3-201ENST00000603262 127 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 RMST_6.1-201ENST00000611980 203 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AC068831.7-201ENST00000616954 363 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 MIR6075-201ENST00000620782 95 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 U6.92-201ENST00000636464 89 ntBASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KCMF1Q9P0J7 AC002546.1-201ENST00000588041 2504 ntBASIC3.4□□□□□ -1.86
KCMF1Q9P0J7 AL353743.1-202ENST00000431724 1695 ntBASIC3.4□□□□□ -1.86
KCMF1Q9P0J7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
KCMF1Q9P0J7 AC073073.2-201ENST00000609827 2578 ntBASIC3.4□□□□□ -1.86
KCMF1Q9P0J7 SNORA71.3-201ENST00000362582 128 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.105-201ENST00000363182 111 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RNU6-379P-201ENST00000363813 104 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.183-201ENST00000363882 113 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RNU6-843P-201ENST00000384454 104 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 UBA52P6-201ENST00000399822 382 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AP000907.1-201ENST00000428428 510 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 GPM6BP3-201ENST00000442797 145 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RPL30P12-201ENST00000474666 353 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RPS4XP22-201ENST00000480755 780 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AP001025.1-201ENST00000486139 332 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AC067942.3-201ENST00000512025 362 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RN7SKP18-201ENST00000516005 275 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RNU2-53P-201ENST00000516257 147 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 MIR2355-201ENST00000517199 87 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AP003733.2-201ENST00000529409 171 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AL356157.2-201ENST00000605122 111 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AC091903.1-201ENST00000624322 454 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 RBBP8P1-201ENST00000449447 1844 ntBASIC3.4□□□□□ -1.87
KCMF1Q9P0J7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 ZNF826P-207ENST00000622273 1910 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 SNORD115-32-201ENST00000364079 82 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.447-201ENST00000384184 113 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RNU6-198P-201ENST00000384258 104 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RNY3P4-201ENST00000384428 101 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 MIR153-2-201ENST00000385225 87 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AP000567.1-201ENST00000406413 156 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AC023141.4-201ENST00000412031 328 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RPS29P4-201ENST00000414733 161 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 SDAD1P3-201ENST00000427380 333 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RPS15AP5-201ENST00000436276 388 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RPS29P31-201ENST00000446147 164 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RNU6-1132P-201ENST00000459214 107 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RNU6-388P-201ENST00000517012 105 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RNU6-389P-201ENST00000517048 105 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AC023157.2-201ENST00000540596 141 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 U6.104-201ENST00000637979 90 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AC009093.8-201ENST00000641769 292 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AC004944.1-201ENST00000517807 3059 ntBASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
KCMF1Q9P0J7 AC010615.1-201ENST00000594254 1764 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms